Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01570 ATGGCGGAGATTTCAAGTTCAGGTTACAAGGAATACGTGGCCGGTTTGTCCGCTGGTGTTGCCGTTGTAGCCACTGGCCACCCCTTTGATACCGTCAAGGTGATGCTGCAAAAGCACAATGCAGAAGCACATATGATTCAGTATAGAAATGGATTGCATTGCACTGCTAGGATATTGAAGACTGAAGGAATCAAAGGACTTTATAGAGGAGCAACACCATCTTTTGTTGGGATGGCAGTTGAAGGATCACTCTTTTTTGGCATTTATTCCCAGACAAAAGTGTACCTTCAGGGGGGAGTTCAAAGTGGGGAACCACGGCCTCAAGTGATAATACCATCTGCAGCTTTTAGTGGTGCCATCATCAGTTTTGTGTTAGGTCCAACAGATCTGATAAAGTGTAGGATGCAGATACAAGGCACTGACTCTTTGGTTCCTAAATCCAGTAGATACAGTAGTCCCCTTGATTGTGCCCTTAAAACTGTAAAAGCTGAAGGGGTGAAAGGAATTTTTCGTGGAGGTTGTGCAACATTGCTTAGAGAATCAATAGGGAATGCTGTCTTTTTCAGTGTATACGAATATGTGCGCTATCACATGCATTCAAATATCAAAGCTAATTCATCCAATCACAGAAACCTGGTTGATATTGGAGTTGGGATCGCCAGTGGTGGCCTTGGTGGTGTGGCTTTTTGGTTGACAGTTTTGCCTCTTGACGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAAAATTGTCCAAGAAATCCTTTTGGGGTCTTGAGTTCAATCTATCAAAGGGCTGGATTGAAGGGAGTCTACCTAATTGCGGATAATACAACAAAGCTCAGGACATCATTCAACATTGCATTTGAAGCTGGTTATTTAATTCTTTTTTTATTAGAGAGCTTGCTTAACGAACTTGGAATCAGAGGCCTTTATTTTAACTGTCCCCTAGGCCTCTACATGCTTTTTCCCCTCCAATTTTTTGGATAG 990 0.4232 MAEISSSGYKEYVAGLSAGVAVVATGHPFDTVKVMLQKHNAEAHMIQYRNGLHCTARILKTEGIKGLYRGATPSFVGMAVEGSLFFGIYSQTKVYLQGGVQSGEPRPQVIIPSAAFSGAIISFVLGPTDLIKCRMQIQGTDSLVPKSSRYSSPLDCALKTVKAEGVKGIFRGGCATLLRESIGNAVFFSVYEYVRYHMHSNIKANSSNHRNLVDIGVGIASGGLGGVAFWLTVLPLDVAKTLIQTNPDKNCPRNPFGVLSSIYQRAGLKGVYLIADNTTKLRTSFNIAFEAGYLILFLLESLLNELGIRGLYFNCPLGLYMLFPLQFFG 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01570 329 Gene3D Mitochondrial carrier domain 10 275 IPR023395 -
Gma13g01570 329 Pfam Mitochondrial carrier protein 9 97 IPR018108 -
Gma13g01570 329 Pfam Mitochondrial carrier protein 219 272 IPR018108 -
Gma13g01570 329 Pfam Mitochondrial carrier protein 113 198 IPR018108 -
Gma13g01570 329 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 132 274 - -
Gma13g01570 329 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 5 132 - -
Gma13g01570 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 197 IPR018108 -
Gma13g01570 329 PANTHER - 132 274 - -
Gma13g01570 329 PANTHER - 5 132 - -
Gma13g01570 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Gma13g01570 329 SUPERFAMILY Mitochondrial carrier 9 272 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01570 Gma-Chr13 30457855 30462625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01570 25 244 Antiporters AT1G79900 29.279 6.36e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01570 K15109 - gmx:100787607 531.561