Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01551 atggagagcgaggcttgttcagagggagagaataatctgaaaaggggtggcactgatgatgatagcaatgagaataacaacaacaataacaataacggaagcagtggaaagattgtgaattgtaatgaggggcagagcaagcccaagcgccagatgaaaaccccctttcaacttgaaaccctcgagaaggcttatgctgtggataattacccttcggagacgatgagggtggagctgtctgagaaattggggttgtcagatcgacagcttcagatgtggttctgccacaggaggttgaaggacaagaaggacttgccgtctaagaagccaccgaggaaggtgctggcagagccattgccggattcgccaagggatgaccctaggttggGCCTTGAGCTTGCTAATGAGTATGGATCCGGGTCCGGTTCAGGTTCCAGCCCGTATGCCCGAGTGGAGCCCCTGAATGTGGCTCCTCTGGGTGTGCCTGGTTATTATGAGTCCCCACAGGCTAAGTTGGAGCATAGAGCAATTGCTTGTGTTGAGGCGCAGTTAGGGGAGCCATTGAGGGAGAACGGACCAATTCTAGGAGTAGAGTTTGATCCATTGCCACCAGATGCCTTTGGGGCACCTATAGCAGTTACAGAACAGCAGAAGCTACCTAGTTTTGCCTATGACAGTAAAATATATGAAAGACATGATGCTAGAACAAATAAGGCTATGGCAAGGACATTCCGTGACAATCAATTTCTACCAAACAAGTCTGCCATTAGGTCTGATGCTTCTGGACAGTTCAGCCAATCTCATTTACATGATCTAGTGGAAGGTTCTGTCAGAAATCCTCCTTTTGCACATGGAAATGAACATCTACCTAGAATTCATGCTACTAAAGGTCATTCTTCTCGTGTTCGTCTTTTGTCTCAACAAGACAAGCAATTGATTCCCTATCAATCTCCTTCTCGGGGTGATGATGTTGCCCCCCAAAGGGAAATGTACCCAAACATAGCTAATGTTGGAAAGAACTCTCACTTTACTGATCACCAAATTGTTGGGCCAGAAAATCTCCATGCTCTACATAGTGGACAAGTTTTGCATAACAATGCAACACGGATTGAGAAGAAACGAAAGAGCGATGATGCCCAAGATGTTGAAGCCCATGAGATGAAAATCCGGAAAGAGCTTGAGAAACAAGATAACCTTAGACGAAAGAGTGAAGAGCGGACAAGAAAAGAAATGGAGAGACAAGATCGTGAAAGAAAGAAGGAAGAAGAAAGATTGATGCGTGAGAGACAGCGAGAGGAGGAAAGAGCAAGACGTGAGCAAAAACGTGAAATTGAGCGAAGGGAAAAGTTTTTGCTGAAAGAAAATTTAAAAGCAGAGAAAATGAGGCAAAGAGAAGAGCTTCGCAAAGAGAGAGATGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCGACTGCTCGTAGAATGGCCAAGGAATCTATGGAACTTATTGAGGATGAACAACTGGAAATGATGGAGTTGGCTGCCTCAAGCAAGGGGTTCTCCTCTATTGTCCATCTTGATTTTGATACTCTGCAACACCTTGAGTCATTTAGGGATTCATTGAGTGTTTTCCCACCAAAGAGTGTAAAGCTAAGAAAACCATTTGCAATCAAACCCTGGATCAACTCAGAAAATAATGTTGGCAATCTTCTCATGGTTTGGAGATTTTTTATTAACTTTGCTGATGTTCTGGAGTTATGGTCTTTTACTCTAGATGAGTTTGTTCAAGCATTTCATGACTATGACTCAAGATTGTTGGGTGAGATACATGTTGCTCTTCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGAGCGAATCAAAATGGTGCTGCTAACTCTGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGTTTTGACATACGAAATTGGCACAAGCACTTAAATCTGTTGACATGGCCAGAAATTTTCCGACAGCTAGCATTGTCTGCTGGATATGGACCACAGTTGAAGAAAAGAAGTATTTCATGGTCATATGCAAATAATAAAGACGAGGGCAGAAATTGTGAAGATATCATTTCTACACTTCGTAATGGTTCAGCGGCTGAAAATGCAGTTGCAAAAATGCACGAGAGAGGTCTGTTAGCCCCTCGAAGATCTAGACATCGATTAACTCCTGGTACAGTTAAGTTTGCAGCATTTCATGTTCTCTCGCTTGAGGGTGAGAAAGGATTGAATGTACTAGAACTTGCAGAAAAAATTCAGAAATCTGGTCTTCGAGACTTGACGACCAGCAAGACACCTGAGGCATCGATTTCTGTTGCTTTAACAAGAGATGCCAAGCTTTTTGAAAGGATAGCTCCATCAACATATTGTGTACGTGAGGCATTTAGAAAGGATCCTGCTGATGCTGAGTCCATTCTTTCAGATGCAAGAAAGAAAATTCAGATATTTGAAAAAGGGTTTCTAGCTGGTGAGGATACCGATGATATTGAAAGAGAAGAGTCAGAAAGTGATGAAATTGATGAGGATCCTGAAGTTGATGATTTAGTAAATCTGTCAAGTGCTAACAGAACATCTGAACAGTGTGATGATTTCTCATCAAATGGAAAAGCAAATTTGGGTCATAATGTTGAACTTCAAGGTGAGTTTGATAAGGATCTACCTTGTTTTCCTGAGAGTGGTTCCAAGAATGCTGATGCTCCAATTGCTGTAACTGGACAACCTGGTGCTGTTGAAGATCTGAATGTTGGAAATCTTGGTGAAGATAATATGGAAATTGATGAAAGCAAGCCTGGAGAGTCATGGGTTCTTGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAACGTCTAAATGCTCTTGTTGTGTTGGTTGGTGTGGCAAATGAAGGAAATTCAATCCGTGTTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCTCTGAAGAAACAAATGTGGGCCGAATCACAAGTAGATAAAGTTCGTCTAAAAGATGATACTTTCAGTAAATCCGATTTTCCATCTATCAATGGGAATAAAGTTGAAATACAATACTCTTGTCCGGTCATGGAGGGCAAGCAAAGCCCATTGATTGGCATTAATATTGGCAACAACAACAATAATAATAATAATAATGTGCCCTCTCCCAGCATTGCAGAAAATCAAAAAGCAGTTTTTGGTGCACAGAGCCAGTCTATTGAAAAGCACTCTTCTGCTCAAGATCTATGCACTGGTCCAGATAACCCTCAGACTCAGTCACTTGGACAATATTCAAAAAGGTCACGTTCTCAGTGGAAATCTTATATTTCCCACATGGCGGAAGAGATGTATGTCTACAGATCCTTACCCCTTGGGCAAGATCGCAGACGTAACCGTTATTGGCAATTTGTTGCATCCGCTTCTTCCAATGATCCTGGTTCTGGCAGGATATTTGTTGAATATCTTGATGGCTATTGGAGGCTTATTGATACTGAAGAGGCCTTTGATGCACTTCTGAATTCACTCGATTCACGTGGGATCAGGGAATCTCATTTGCGTCTAATGTTGCAAAAGGTTGAGAGTTCCTTTAAGGAAAATGTTCGTAAGAATACCCAATGTTCCAAAATTGGAAGCATAGGTGAAACATGTGTTAAAAATGAAGCTGATGAAACAGATTCCAGTCCTGATCGGCATACTGGATCTGACAGTCCTAGCAGTACCCTTTGTGGCTTGAACTCTGACACTTCAGAAActtcatcatccttcaaaatcgagcttgggaaaagtgagagtgacaagaAATCGGCCTTGAGAAGGTATCAAGATTTTCAAAAATGGATGTGGAAAGAATGCTATAACTCATCTATATTGTGTGCAATGAAATATGGGAAGAAGAGATGCAAACCTCAGGTTGTCATGTGTGATATCTGTCTCAACCCTTATTTCTTTGAAGACTCCCATTGCAGTGGTTGCCACCGGACATTTCCCTCAAATAGTGGATTTAGTTTTTCTAAACATGCATTTCAATGTGGAGATAAATCATCGAAAGATATTTGTATTTTGGATTCTCTTCCCTTGCGGACAAGATTGCTGAAGGCCATGCTAGCTTTTATTGAGGCATCTGTTCTGCCCGAAGCATTAAAATCAAATTGGACAGAAGATATTAGGAGGCATTGGAGTGTGAAGTTGAGTAAATCATCTTCTATTGAGGAACTGCTACAGATATTGACCCTACTTGAGAGAGCATTGAAGCAAGACTTTTTATCATCAACCTTCTCTACAACAGGGGAACAGTTGGGTTTGAACAGTATGTCAAAGAGTGCTGCACAAACCTCTACTGATCCTGAATCAGTTGCTGTACTTCCATGGGTTCCACTGACCACTTCAGCTGTGTCTCTCAGACTTCTTGAGTTTGATGCATCCATTGTCTACGTACCGCATGAGAAACCTGAACCTTGTGAGGAGAAAGAAGATAGGGTATACATAAAGCTTCCTTCAAGATATAATCCTTCTAAATCTAGTAAAGTGACTGAAGCAGCAGACTTGGACCGTGATGAATTCATGAAAGTTAAATCTGCTCCTGTGAAAATAGTGCAAAGCAACAATAAACGAGGACGAGGGAGCCGTGATAAAGGACGGGGTAAAAAGCTATCTAAAACCAAACAAAATACTGGCCGTCGTGGTGCTAAAGTTGCTGGGAATGCAGGTCAGAGGATTAAAAAACAGGGAGTGGGATCACAAGGACAAGCTGGTGGGCGTGGTCGCCGAACAGTTAGGAAAAGAAGAGTGGGGAAGAAGGCTGTTGAAGATTTGTTGATGGGCCATAGGGATGCCAGTCATAGCTCCAGCATTGGTAGAGAATCATTGAGAAGCTTGGATGATGACTGGGATGATGAAAAGGCAAGTCCCATGACTCCCATCCACATGGGGGCTGCTAACAGTAATAACAGCATTGAAGAGGTTgaatctgatgacaatgtcgaagcaatggaatctgatgacaatgttcaagcaatggagtctgatgacaaagtccaagcaatggaatccgatgacaatgtccaagcagcagaatctgatgacaatggccaagcTGTGGAATATGATCAAGGAAACTGGGAAATAGGTTTTAATGGTGCCCCCAGCAGATGGAGTAGGGATTTGGTAGGAGGAATTAGCGATGAGGATGAGGATGAGGATGCGGAAGCTTCTGAAGATGACAATGACAATGGCATTGGCATTGAAAACAATGAGGAGGAGGATTCAGAGGCAGATGCTATGAGTGAGGAGGGTTCAGATGGTACTGCAAACAGAATTGTAAATGAAGAAAGCTCAGACTCGGATGTCTCTGAAGATTCTTCTGATTAG 5391 0.3762 MESEACSEGENNLKRGGTDDDSNENNNNNNNNGSSGKIVNCNEGQSKPKRQMKTPFQLETLEKAYAVDNYPSETMRVELSEKLGLSDRQLQMWFCHRRLKDKKDLPSKKPPRKVLAEPLPDSPRDDPRLGLELANEYGSGSGSGSSPYARVEPLNVAPLGVPGYYESPQAKLEHRAIACVEAQLGEPLRENGPILGVEFDPLPPDAFGAPIAVTEQQKLPSFAYDSKIYERHDARTNKAMARTFRDNQFLPNKSAIRSDASGQFSQSHLHDLVEGSVRNPPFAHGNEHLPRIHATKGHSSRVRLLSQQDKQLIPYQSPSRGDDVAPQREMYPNIANVGKNSHFTDHQIVGPENLHALHSGQVLHNNATRIEKKRKSDDAQDVEAHEMKIRKELEKQDNLRRKSEERTRKEMERQDRERKKEEERLMRERQREEERARREQKREIERREKFLLKENLKAEKMRQREELRKERDAERRKAALEKATARRMAKESMELIEDEQLEMMELAASSKGFSSIVHLDFDTLQHLESFRDSLSVFPPKSVKLRKPFAIKPWINSENNVGNLLMVWRFFINFADVLELWSFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGANQNGAANSGGGHPEIVEGAYAWGFDIRNWHKHLNLLTWPEIFRQLALSAGYGPQLKKRSISWSYANNKDEGRNCEDIISTLRNGSAAENAVAKMHERGLLAPRRSRHRLTPGTVKFAAFHVLSLEGEKGLNVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYCVREAFRKDPADAESILSDARKKIQIFEKGFLAGEDTDDIEREESESDEIDEDPEVDDLVNLSSANRTSEQCDDFSSNGKANLGHNVELQGEFDKDLPCFPESGSKNADAPIAVTGQPGAVEDLNVGNLGEDNMEIDESKPGESWVLGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRVVLEDRLEAANALKKQMWAESQVDKVRLKDDTFSKSDFPSINGNKVEIQYSCPVMEGKQSPLIGINIGNNNNNNNNNVPSPSIAENQKAVFGAQSQSIEKHSSAQDLCTGPDNPQTQSLGQYSKRSRSQWKSYISHMAEEMYVYRSLPLGQDRRRNRYWQFVASASSNDPGSGRIFVEYLDGYWRLIDTEEAFDALLNSLDSRGIRESHLRLMLQKVESSFKENVRKNTQCSKIGSIGETCVKNEADETDSSPDRHTGSDSPSSTLCGLNSDTSETSSSFKIELGKSESDKKSALRRYQDFQKWMWKECYNSSILCAMKYGKKRCKPQVVMCDICLNPYFFEDSHCSGCHRTFPSNSGFSFSKHAFQCGDKSSKDICILDSLPLRTRLLKAMLAFIEASVLPEALKSNWTEDIRRHWSVKLSKSSSIEELLQILTLLERALKQDFLSSTFSTTGEQLGLNSMSKSAAQTSTDPESVAVLPWVPLTTSAVSLRLLEFDASIVYVPHEKPEPCEEKEDRVYIKLPSRYNPSKSSKVTEAADLDRDEFMKVKSAPVKIVQSNNKRGRGSRDKGRGKKLSKTKQNTGRRGAKVAGNAGQRIKKQGVGSQGQAGGRGRRTVRKRRVGKKAVEDLLMGHRDASHSSSIGRESLRSLDDDWDDEKASPMTPIHMGAANSNNSIEEVESDDNVEAMESDDNVQAMESDDKVQAMESDDNVQAAESDDNGQAVEYDQGNWEIGFNGAPSRWSRDLVGGISDEDEDEDAEASEDDNDNGIGIENNEEEDSEADAMSEEGSDGTANRIVNEESSDSDVSEDSSD 1796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01551 1796 Pfam HB1, ASXL, restriction endonuclease HTH domain 739 807 IPR007759 GO:0006355
Gma13g01551 1796 ProSiteProfiles DDT domain profile. 557 616 IPR018501 -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 389 441 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1084 1107 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1618 1643 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 838 858 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1549 1564 - -
Gma13g01551 1796 CDD homeodomain 49 103 IPR001356 GO:0003677
Gma13g01551 1796 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1128 1200 IPR028941 -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1618 1796 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1 56 - -
Gma13g01551 1796 Pfam Homeodomain 47 103 IPR001356 GO:0003677
Gma13g01551 1796 MobiDBLite consensus disorder prediction 22 53 - -
Gma13g01551 1796 SMART testlast3 557 616 IPR018501 -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 7 21 - -
Gma13g01551 1796 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 945 987 IPR028942 -
Gma13g01551 1796 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 15 1796 IPR044977 GO:0006357
Gma13g01551 1796 SMART HOX_1 46 108 IPR001356 GO:0003677
Gma13g01551 1796 Gene3D - 16 105 - -
Gma13g01551 1796 Coils Coil 453 484 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 102 146 - -
Gma13g01551 1796 ProSiteProfiles HARE-type HTH domain profile. 739 808 IPR007759 GO:0006355
Gma13g01551 1796 Coils Coil 404 447 - -
Gma13g01551 1796 Coils Coil 382 402 - -
Gma13g01551 1796 PANTHER HOMEOBOX DOMAIN PROTEIN 15 1796 - -
Gma13g01551 1796 Pfam DDT domain 559 613 IPR018501 -
Gma13g01551 1796 SUPERFAMILY Homeodomain-like 36 103 IPR009057 -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1239 1259 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1228 1259 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1534 1602 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 1733 1769 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 840 858 - -
Gma13g01551 1796 MobiDBLite consensus disorder prediction 102 131 - -
Gma13g01551 1796 ProSiteProfiles 'Homeobox' domain profile. 44 104 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01551 Gma-Chr13 30308947 30318360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01551 4 1770 Homeobox Transcription Factor Family AT1G28420 46.765 0.0 1326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Gma13g01551 WSD 4.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01551 - - gmx:100784945 3185.59