Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01546 ATGACATGGTGCAATGACTCAGATGAGGAGAGGGGAATTGATCAACTGGTTGCACCAGCTATTACTCCTACTTCAACTAATAACACTACTGTTCTTACTCATGATCATCACAGAAAACCAACTGAAATTCGCACCATAACTTGCCCCTCATGTGGTCATAACATTGAATTCCAAGATCAGACTGGAATCAATGACTTGCCGGGGTTACCAGCTGGGGTGAAGTTTGATCCGAATGACCAGGAGATATTAGAGCATTTGGAAGCAAAGGTATTCTCTGATGTGCCAAAGCTTCATCCACTTATTGATGAGTTCATACCAACGCTTGAAGGAGAGAATGGGATCTGTTATACTCATCCAGAAAAGCTTCCAGGTGTAAGCAAAGATGGACAAATCCGCCACTTCTTTCACAGGCCATCTAAAGCGTACACAACCGGAACAAGGAAAAGAAGAAAGGTTCACACTGATAAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGAAAAACAAGACCAGTTTTCGTAGGTGGTGCTGTGAAGGGTTTCAAGAAAATCCTTGTCCTCTACACCAACTATGGAAGACAACAGAAGCCCGAGAAGACCAATTGGGTGATGCATCAATACCACCTTGGTACTAGCGAAGAAGAGAAAGATGGAGAGTTGGTGGTTTCAAAGATTTTCTACCAAACACAACCTCGACAATGTGGTAATAATTCCATTATAAAGCAGGATCTTTATGATGAAGAAAGATTGATGTCTAACCAAATTAGTGTCCATAATGATGATGACAATAATATAATACCTAGAAGTAATAATGCAAGTGCTCTCATGGACTACTACAATCCTTCTTTCATAAATTATGACCAATTAGGTGGTCGTAGTAATAGGGAAAGTTCAGCTCAACTTATTCCAAATTTGGCCATGCAAGGTGATAGCTCTTCTTTCATTCGATTAGCAATGGATGCAACCAAAGCCATGCTGGACAGAAAATAG 990 0.4091 MTWCNDSDEERGIDQLVAPAITPTSTNNTTVLTHDHHRKPTEIRTITCPSCGHNIEFQDQTGINDLPGLPAGVKFDPNDQEILEHLEAKVFSDVPKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDKEGSETRWHKTGKTRPVFVGGAVKGFKKILVLYTNYGRQQKPEKTNWVMHQYHLGTSEEEKDGELVVSKIFYQTQPRQCGNNSIIKQDLYDEERLMSNQISVHNDDDNNIIPRSNNASALMDYYNPSFINYDQLGGRSNRESSAQLIPNLAMQGDSSSFIRLAMDATKAMLDRK 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01546 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 313 - -
Gma13g01546 329 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 313 IPR044799 GO:0003700
Gma13g01546 329 Gene3D NAC domain 78 232 IPR036093 GO:0003677|GO:0006355
Gma13g01546 329 Pfam No apical meristem (NAM) protein 70 209 IPR003441 GO:0003677|GO:0006355
Gma13g01546 329 ProSiteProfiles NAC domain profile. 69 228 IPR003441 GO:0003677|GO:0006355
Gma13g01546 329 SUPERFAMILY NAC domain 64 228 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01546 Gma-Chr13 30239202 30242393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01546 1 237 NAC Transcription Factor Family AT4G28500 69.874 2.20e-124 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma13g01546 NAM 4.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01546 - - gmx:100783888 669.848