LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g01536	ATGTTGCTTGAACTTGCACTTGGTTTATTGGTTTTGGCTCTGTTTCTGCACTTGCGTCCCACACCCACTGCAAAATCAAAAGCACTTCGCCATCTCCCAAACCCACCAAGCCCAAAGCCTCGTCTTCCCTTCATAGGACACCTTCATCTCTTAAAAGACAAACTTCTCCACTACGCACTCATCGACCTCTCCAAAAAACATGGTCCCTTATTCTCTCTCTACTTTGGCTCCATGCCAACCGTTGTTGCCTCCACACCAGAATTGTTCAAGCTCTTCCTCCAAACGCACGAGGCAACTTCCTTCAACACAAGGTTCCAAACCTCAGCCATAAGACGCCTCACCTATGATAGCTCAGTGGCCATGGTTCCCTTCGGACCTTACTGGAAGTTCGTGAGGAAGCTCATCATGAACGACCTTCTCAACGCCACCACTGTAAACAAGTTGAGGCCTTTGAGGACCCAACAGATCCGCAAGTTCCTTAGGGTTATGGCCCAAGGCGCAGAGGCACAGAAGCCCCTTGACTTGACCGAGGAGCTTCTGAAATGGACCAACAGCACCATCTCCATGATGATGCTCGGCGAGGCTGAGGAGATCAGAGACATCGCTCGCGAGGTTCTTAAGATCTTTGGCGAATACAGCCTCACTGACTTCATCTGGCCATTGAAGCATCTCAAGGTTGGAAAGTATGAGAAGAGGATCGACGACATCTTGAACAAGTTCGACCCTGTCGTTGAAAGGGTCATCAAGAAGCGCCGTGAGATCgtgaggaggagaaagaacggagaggttgttgagggtgaggtcagcggggttttccttgacactttgcttgaattcgctgaggatgagaccatggagatcaaaatcaccaaggaccacatcaagggtcttgttgtcgactttttctcggcaggaacagactccacagcggtggcaacagagtgggcattggcagaactcatcaacaatcctaaggtgttggaaaaggctcgtgaggaggtctacagtgttgtgggaaaggacagacttgtggacgaagttgacactcaaaaccttccttacattagagcaatcgtgaAGGAGACATTCCGCATGCACCCGCCACTCCCAGTGGTCAAAAGAAAGTGCACAGAAGAGtgtgagattaatggatatgtgatcccagagggagcattgattctcttcaatgtatggcaagtaggaagagaccccaaatactgggacagaccatcggagttccgtcctgagaggttcctagagacaggggctgaaggggaagcagggcctcttgatcttaggggacaacattttcaacttctcccatttgggtctgggaggagaatgtgccctggagtcaatctggctacttcgggaatggcaacacttcttgcatctcttattcagtgcttcgacttgcaagtgctgggtccacaaggacagatattgaagggtggtgacgccaaagttagcatggaagagagagccggcctcactgttccaagggcacatagtcttgtctgtgttccacttgcaaggatcggcgttgcatctaaactcctttcttaa	1566	0.2631	MLLELALGLLVLALFLHLRPTPTAKSKALRHLPNPPSPKPRLPFIGHLHLLKDKLLHYALIDLSKKHGPLFSLYFGSMPTVVASTPELFKLFLQTHEATSFNTRFQTSAIRRLTYDSSVAMVPFGPYWKFVRKLIMNDLLNATTVNKLRPLRTQQIRKFLRVMAQGAEAQKPLDLTEELLKWTNSTISMMMLGEAEEIRDIAREVLKIFGEYSLTDFIWPLKHLKVGKYEKRIDDILNKFDPVVERVIKKRREIVRRRKNGEVVEGEVSGVFLDTLLEFAEDETMEIKITKDHIKGLVVDFFSAGTDSTAVATEWALAELINNPKVLEKAREEVYSVVGKDRLVDEVDTQNLPYIRAIVKETFRMHPPLPVVKRKCTEECEINGYVIPEGALILFNVWQVGRDPKYWDRPSEFRPERFLETGAEGEAGPLDLRGQHFQLLPFGSGRRMCPGVNLATSGMATLLASLIQCFDLQVLGPQGQILKGGDAKVSMEERAGLTVPRAHSLVCVPLARIGVASKLLS	521

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g01536	521	Pfam	Cytochrome P450	36	475	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PRINTS	P450 superfamily signature	304	321	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PRINTS	P450 superfamily signature	357	368	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PRINTS	P450 superfamily signature	440	449	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PRINTS	P450 superfamily signature	449	460	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PANTHER	2-HYDROXYISOFLAVANONE SYNTHASE	2	518	-	-
	Gma13g01536	521	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	442	451	IPR017972	GO:0005506\|GO:0016705
	Gma13g01536	521	Gene3D	Cytochrome P450	24	509	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	SUPERFAMILY	Cytochrome P450	30	512	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Gma13g01536	521	PRINTS	E-class P450 group I signature	64	83	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g01536	Gma-Chr13	30068421	30070696	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma13g01536	32	517	Cytochrome P450	AT5G06900	35.614	7.62e-106	324

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g01536	-		-	gmx:606705	971.459

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