Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01535 ATGGTTTTCTGTGGCAACAGCACTGAAGAGAGTGAACTGCATCATgctcaaattcatttgtacaaacacgtatacaactttgtgagttccatggctcttaagtctgctatggaattaggcatagcagacgtaatccatagccacggaaaacccatgACTATTTCCGAGTTATCCTCAGCTCTCAAATTGCACCCTTCAAAAGTGAGTGTCCTCCAACGCTTTCTCCGCCTTTTAACGCACAATGGGTTCTTTGCAAAAACAATATTGCCGTCAAAGAACGGTGTAGAAGGAGGAGAAGAAATAGCGTATGCTCTTACTCCTCCTTCGAAGCTTCTAATAAGAAACAAGTCAATATGTTTGGCGCCTATTGTGAAGGGAGCTCTTCATTCGAGCTCCCTTGACATGTGGCATTCCTCCAAGAAATGGTTCAGTGAGGATAAGGAACTGACACTGTATGAGAGTGCAACTGGGGAGAGTTTCTGGGACTTTCTCAACAAAACCACTGAATCTGACACGCTGGGTATGTTTCAAGATGCCATGGCTGCAGATTCTAAGGTGTTCAAACTTGCACtcgaggaatgcaagcatgtgttcgagggattgggttccctcgtcgatgtgggtggtggaactggtgttgtcacaagactcatcagtgaaaccttccctcacttgaaatgcactgtgtttgaccaaccacaggttgtggctaatttaactggaaacgaaaatttgaactttgttggtggagatatgttcaagtccatcccctctgccgatgcagttttactcaagtgggttctgcatgattggaacgatgaactctctgtgaagatattgaagaactgcaaagaagctatttcagggaaagggaaagaaggaaaggttataattatagacatagcaattgatgaagtaggtgatgatcgcgaaatgactgaattgaagctagactatgatttagtgatgttgactatgtttaatggaaaagaaagagaaaagaaagagtgggagaaactaatttacgaggcaggattcagcaactacaaaattattcccatatgtggattcaaatctctcattgaagtttatccttaa 1098 0.1867 MVFCGNSTEESELHHAQIHLYKHVYNFVSSMALKSAMELGIADVIHSHGKPMTISELSSALKLHPSKVSVLQRFLRLLTHNGFFAKTILPSKNGVEGGEEIAYALTPPSKLLIRNKSICLAPIVKGALHSSSLDMWHSSKKWFSEDKELTLYESATGESFWDFLNKTTESDTLGMFQDAMAADSKVFKLALEECKHVFEGLGSLVDVGGGTGVVTRLISETFPHLKCTVFDQPQVVANLTGNENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGKGKEGKVIIIDIAIDEVGDDREMTELKLDYDLVMLTMFNGKEREKKEWEKLIYEAGFSNYKIIPICGFKSLIEVYP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01535 365 Gene3D - 3 112 IPR036388 -
Gma13g01535 365 SUPERFAMILY "Winged helix" DNA-binding domain 10 116 IPR036390 -
Gma13g01535 365 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 365 IPR016461 GO:0008168
Gma13g01535 365 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Gma13g01535 365 Pfam O-methyltransferase domain 136 347 IPR001077 GO:0008171
Gma13g01535 365 Gene3D Vaccinia Virus protein VP39 113 365 IPR029063 -
Gma13g01535 365 PANTHER O-METHYLTRANSFERASE 5 365 IPR016461 GO:0008168
Gma13g01535 365 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 5 365 - -
Gma13g01535 365 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 119 364 IPR029063 -
Gma13g01535 365 PIRSF O-mtase 4 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01535 Gma-Chr13 30060019 30061660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01535 28 352 Monolignol Biosynthesis Gene Families AT5G54160 33.841 3.47e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01535 K22588 - gmx:106795493 717.998