Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01523 ATGGGTTCAGGTGATTGGTTTAAGACAATAATTAGCTCAAGAAAATCAAAAGAAGGAAGATCAAAGAAATTAAAGACTAAGATTTATACAAGAAAAAAGTCCAATGGTTTAGCAAATGGAATGAAAAGCGAAAATCTAGAGTCAGATGGGGTATCAGTTGAAACTATTGCTGCAACAAGGATCCAAACAGCATTCCGAGCTTATAAGGCTAGAAAATATTTACACCGCTTGAGAGGATTCACAAAACTGAAGATCCAGACTCAAGGTTCCTCTGCTAAAAAACAAGCCGTTACCACTATAACTTATCTTCATTCATGGAGCAAGATACAGGCTGAGATTAGAGCTCGTCGTATATGTATGGTTACAGAAGACAGAATCAGGCGGAAGATAATACATTCTCAACTAAAACTTGAGGCCAAGATTCATGACCTGGAGGTGGAATGGTGTAGTGGTTCTGAAACCAAGAAGGAAATCCTTTCAAGGTTACATCAAAGagaagaagcagcagtcaagagggaaagaaccatggcatatgccttctctcatcagtggagggccagctctagccaagggctaggtaattatgaacttggcaaagctagttggagttggagctggaaggatcgttggattgctgcacgcccTTGGGAAAGCCGCGTACCAAGTGTAACAAACACTAGCCCCGAGAAAGATCAAAATAAGAAGCCAAGAAAAGTTCAGAAGGATAGGAATTCACCAACATCAAAAAAACCAGTTTCAGTTAAAACTCCTTCAGCTAATGCTAAAGGGACAAAACCTTTAAGATCTCAGAGGCTCTTTGCGTTAGCACAGCACCTTCGCCAGTACAAGGCACCGTCTTTCCCCGAAGATATTGTGGAACAAAGCATTGAAGAGATTGGTGGCAAGGTTGTTTCTCAGGTGGGATTTCAAGAATCAGCCATCCCAATTGGCCAAAACCCTGAGAAATTCAGACCCAAAAAAGCTGCTGTTTTGATCTGCCTATTCGAAGGGGATGATGGGGATCTAAGGGTCATTCTCACCAAGCGCTCTTCCAAGCTTTCTACTCACTCGGGTGAAGTGGCATTGCCTGGTGGGAAAACTGAGGAGGGGGATAAGGATGATGGGGATACTGCAAAAAGAGAGGCAAAGGAAGAAATTGGGTTGGACCCGGAACTTGTCAATGTTGTTACTGTACTTGAACCATTCTTGTCTAAGCACCTCCTAAGGGTAGTTCCAGTCATTGGCATACTTCATGACAAGAAAGCATTCAAACCTGTTCTGAATCCAGCTGAAGTGGAAGCAGTATTTGATGCACCTTTGGAAATGTTTCTCAAGGATGAAAATCGGAGACAGGATGAGAGGGAGTGGATGGGAGAGAAGTATTTGTTGCATTTCTTTGACTATGATATCGGGCATAAAAAATACATCATATGGGGTTTAACTGCTGGGATCTTGATTAGGGCTGCATCAGTTGTGTACCAACGGCAGCCAGCTTTTGTGGAGCAGAACCCTAAATTCAAGCTTCCACAGGATCCAGAGTTCTAG 1545 0.3806 MGSGDWFKTIISSRKSKEGRSKKLKTKIYTRKKSNGLANGMKSENLESDGVSVETIAATRIQTAFRAYKARKYLHRLRGFTKLKIQTQGSSAKKQAVTTITYLHSWSKIQAEIRARRICMVTEDRIRRKIIHSQLKLEAKIHDLEVEWCSGSETKKEILSRLHQREEAAVKRERTMAYAFSHQWRASSSQGLGNYELGKASWSWSWKDRWIAARPWESRVPSVTNTSPEKDQNKKPRKVQKDRNSPTSKKPVSVKTPSANAKGTKPLRSQRLFALAQHLRQYKAPSFPEDIVEQSIEEIGGKVVSQVGFQESAIPIGQNPEKFRPKKAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVALPGGKTEEGDKDDGDTAKREAKEEIGLDPELVNVVTVLEPFLSKHLLRVVPVIGILHDKKAFKPVLNPAEVEAVFDAPLEMFLKDENRRQDEREWMGEKYLLHFFDYDIGHKKYIIWGLTAGILIRAASVVYQRQPAFVEQNPKFKLPQDPEF 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01523 514 Pfam NUDIX domain 326 443 IPR000086 -
Gma13g01523 514 MobiDBLite consensus disorder prediction 365 383 - -
Gma13g01523 514 MobiDBLite consensus disorder prediction 246 265 - -
Gma13g01523 514 PANTHER NUDIX HYDROLASE 323 505 IPR045121 GO:0010945
Gma13g01523 514 SUPERFAMILY Nudix 324 485 IPR015797 -
Gma13g01523 514 MobiDBLite consensus disorder prediction 220 267 - -
Gma13g01523 514 MobiDBLite consensus disorder prediction 356 383 - -
Gma13g01523 514 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 269 321 - -
Gma13g01523 514 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 323 505 - -
Gma13g01523 514 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 314 490 - -
Gma13g01523 514 PANTHER NUDIX HYDROLASE 269 321 IPR045121 GO:0010945
Gma13g01523 514 CDD CoAse 326 486 IPR045121 GO:0010945
Gma13g01523 514 MobiDBLite consensus disorder prediction 230 245 - -
Gma13g01523 514 ProSiteProfiles Nudix hydrolase domain profile. 325 481 IPR000086 -
Gma13g01523 514 ProSiteProfiles IQ motif profile. 54 82 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01523 Gma-Chr13 29900717 29908531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01523 1 268 IQD Protein Family AT2G33990 52.727 5.84e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01523 - - gmx:100802963 526.554