Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01500 ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGAAGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAATGGGAGATTGACCCCTCCAAGCTTGTCATCAAGACTGTCATTGCTCGTGGCACTTTTGGCACTGTCCATCGTGGAATTTACGATGGCCAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAAGGCCATCGGTCAGATGCTGAAATAGCTTCTTTGAGAGCGGCTTTTACACAGGAAGTTGCTGTTTGGCACAAGCTTGAACATCCTAATGTAACCAAGTTTATTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACGGAAAATGGTCATATAGGCATGCCGAGTAACGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGGGGTGCGCTGAAGTCTTATCTCATTAAAAATCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTTCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTAGCTCGTATTGAGGCCTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGCAATCCATACAATAGAAAGTGTGATGTGTACAGTTTCGGAATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGCTTCTCAGAAGTGACATCAGCTGTCGTACGACAGAATTTGAGGCCAGAGATTCCGCGATGTTGTCCTAGCGCTCTGGCCAATGTGATGAAAAGATGCTGGGATGCGAATCCTGACAAGAGGCCAGAGATGGATGAAGTGGTGACCATGTTGGAAGCTATTGACACTTCAAAGGGTGGAGGTATGATCCCTCATGATCAGCCTCAGGGTTGTTTATGTTTTCGCAGTTATCGAGGACCTTGA 1101 0.4559 MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLEHPNVTKFIGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSALANVMKRCWDANPDKRPEMDEVVTMLEAIDTSKGGGMIPHDQPQGCLCFRSYRGP 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01500 366 CDD STKc_MAP3K-like 69 337 - -
Gma13g01500 366 PRINTS Tyrosine kinase catalytic domain signature 160 173 IPR001245 GO:0004672|GO:0006468
Gma13g01500 366 PRINTS Tyrosine kinase catalytic domain signature 198 216 IPR001245 GO:0004672|GO:0006468
Gma13g01500 366 PRINTS Tyrosine kinase catalytic domain signature 264 286 IPR001245 GO:0004672|GO:0006468
Gma13g01500 366 PRINTS Tyrosine kinase catalytic domain signature 308 330 IPR001245 GO:0004672|GO:0006468
Gma13g01500 366 SMART serkin_6 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01500 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gma13g01500 366 ProSiteProfiles Protein kinase domain profile. 63 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01500 366 Coils Coil 24 44 - -
Gma13g01500 366 Pfam Protein tyrosine and serine/threonine kinase 64 337 IPR001245 GO:0004672|GO:0006468
Gma13g01500 366 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 360 - -
Gma13g01500 366 PIRSF ILK 12 346 - -
Gma13g01500 366 Gene3D Transferase(Phosphotransferase) domain 1 163 349 - -
Gma13g01500 366 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 360 - -
Gma13g01500 366 Gene3D Phosphorylase Kinase; domain 1 51 146 - -
Gma13g01500 366 MobiDBLite consensus disorder prediction 31 53 - -
Gma13g01500 366 SUPERFAMILY Protein kinase-like (PK-like) 45 337 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01500 Gma-Chr13 29646119 29650575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01500 11 366 MAP Kinase Kinase Kinase AT3G22750 69.722 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma13g01500 PK_Tyr_Ser-Thr 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01500 - - gmx:100796762 736.873