Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01496 ATGGCTCAGGGAAGAAGCAGTGCTGCAACAATGCTATTGTTATGTATGTTAGTGCTTTACTCTGAGATGGTTCATGCAGCCACCTATGTGGTTGGTGATGCAACTGGTTGGGCGTATAATGTCAATAACTGGCCTAATGGAAAGAGTTTTAAGGCTGGTGATATACTCGAATTCAAATATAGTCCTTTCGCTCACAACGTGATACAAGTGGACGAGTTTGGATACAATACATGCATTCCTACATTCAACTCAAGATTGTTCTTTTCAGGAGATGATCACATCCAGCTTGCCAAGGGTCTAAACTACTTCATCTGCGGTTTTCCTGGTCACTGCCAGCTGCATGGGATGAGAATAGCAGTCAATGCTACTGCATGA 375 0.432 MAQGRSSAATMLLLCMLVLYSEMVHAATYVVGDATGWAYNVNNWPNGKSFKAGDILEFKYSPFAHNVIQVDEFGYNTCIPTFNSRLFFSGDDHIQLAKGLNYFICGFPGHCQLHGMRIAVNATA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01496 124 ProSiteProfiles Phytocyanin domain profile. 27 124 IPR003245 GO:0009055
Gma13g01496 124 Pfam Plastocyanin-like domain 39 112 IPR003245 GO:0009055
Gma13g01496 124 PANTHER BLUE COPPER PROTEIN 8 121 IPR039391 GO:0009055
Gma13g01496 124 SUPERFAMILY Cupredoxins 27 122 IPR008972 -
Gma13g01496 124 Gene3D - 25 124 IPR008972 -
Gma13g01496 124 PANTHER BASIC BLUE-LIKE PROTEIN 8 121 - -
Gma13g01496 124 CDD Plantacyanin 27 122 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01496 Gma-Chr13 29620196 29620858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01496 8 124 Phytocyanin Superfamily AT1G17800 39.024 1.17e-20 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01496 - - gmx:100818617 263.848