Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gma13g01466 | ATGAAGAAGGTGAGGAGAAAGATCGGCAAGTATGAGGTGGGTCGAACAATTGGCGAAGGCACCTTCGCCAAGGTTAAGTTCGCAAGAAACTCGGAGACAGGGGATAGCGTGGCTATTAAAATCATGGCTAAGACCACCATTCTCCAGCACAGAATGGTTGAACAGATTAAAAGAGAGATATCCATTATGAAGATTGTCAGGAATCCTAATATAGTTAGATTACACGAGGTTTTGGCTAGCCAGACCAGGATCTACATAATCCTTGAATTTGTAATGGGAGGGGAACTATATGATAAAATTGTTCAGCAGGGAAAGCTTTCTGAAAATGAATCTAGGCGCTACTTTCAACAACTTATAGACACAGTTGATCATTGTCATAGAAAGGGTGTGTACCATAGAGACTTGAAGCCTGAAAATCTTCTTCTTGATGCTTACGGAAATTTGAAGGTTTCTGACTTTGGATTGAGTGCATTGACTAAACAGGGTGTTGACCTTCTTCACACCACTTGTGGGACCCCAAACTATGTTGCCCCTGAGGTACTCAGCAATAGAGGATATGATGGTGCAGCAGCTGATGTTTGGTCATGTGGAGTCATCCTATATGTTCTAATGGCTGGATATCTTCCTTTTGAGGAGGCAGACCTTCCAACACTGTATAGAAGGATAAATGCTGCAGAATTTGTTTGCCCATTCTGGTTTTCTGCAGACACAAAGTCATTCATACAAAAAATTCTGGATCCTAATCCTAAAACACGGGTGAAAATTGAAGAAATAAGGAAAGAGCCATGGTTCAAGAAAAACTATTTTCCTGTCAAACTCGGGGAAGACGAGCAAGTGAATTTGGATGATGTTCGAGCTGTTTTTGATGATATTGAGGACCAATATGTTGCTGAAAGGTCAGAAATTACTGAGGGAGGTCCTCTGATAATGAATGCATTTGAGATGATTGCCTTATCACAAGGGTTGAATCTTTCACCACTATTTGATAGGCTTCAGGATAATGTAAAGCGGCAAACTCGTTTTGTCTCCCGTAAACCAGCAAAAGTTATAATTTCTTCAATTGAAGCTGTTGCAGAGTCAATGGGTCTTAAGGTCCATTCTCGCAATTACAAGGTGAGGCTTGAAGGCGTTTCTGCAAACAGGGTTGGACCATTTGCTGTGGTCTTGGAGGTGTTTGAAGTTGCACCATCCCTTTTCATGGTTGATGTTCGGAGGGCCACCGGGGATACTTTTGACTACCACAAGTTTTACATGAATTTTTGTGCCAAACTAGGAAACATTATTTGGAGACCGGCAGGGACTATGCCAAATTCTAATCTGCTCAAGCAAATGACTTTATAA | 1341 | 0.4146 | MKKVRRKIGKYEVGRTIGEGTFAKVKFARNSETGDSVAIKIMAKTTILQHRMVEQIKREISIMKIVRNPNIVRLHEVLASQTRIYIILEFVMGGELYDKIVQQGKLSENESRRYFQQLIDTVDHCHRKGVYHRDLKPENLLLDAYGNLKVSDFGLSALTKQGVDLLHTTCGTPNYVAPEVLSNRGYDGAAADVWSCGVILYVLMAGYLPFEEADLPTLYRRINAAEFVCPFWFSADTKSFIQKILDPNPKTRVKIEEIRKEPWFKKNYFPVKLGEDEQVNLDDVRAVFDDIEDQYVAERSEITEGGPLIMNAFEMIALSQGLNLSPLFDRLQDNVKRQTRFVSRKPAKVIISSIEAVAESMGLKVHSRNYKVRLEGVSANRVGPFAVVLEVFEVAPSLFMVDVRRATGDTFDYHKFYMNFCAKLGNIIWRPAGTMPNSNLLKQMTL | 446 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gma13g01466 | 446 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672|GO:0006468 | |
Gma13g01466 | 446 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 4 | 442 | - | - | |
Gma13g01466 | 446 | Gene3D | Kinase associated domain 1, KA1 | 308 | 430 | - | - | |
Gma13g01466 | 446 | PANTHER | - | 4 | 442 | - | - | |
Gma13g01466 | 446 | Pfam | NAF domain | 307 | 366 | IPR004041 | GO:0007165 | |
Gma13g01466 | 446 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 307 | - | - | |
Gma13g01466 | 446 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 299 | IPR011009 | - | |
Gma13g01466 | 446 | ProSiteProfiles | Protein kinase domain profile. | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma13g01466 | 446 | SMART | serkin_6 | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma13g01466 | 446 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 40 | IPR017441 | GO:0005524 | |
Gma13g01466 | 446 | CDD | CIPK_C | 311 | 421 | - | - | |
Gma13g01466 | 446 | Pfam | Protein kinase domain | 11 | 264 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gma13g01466 | 446 | ProSiteProfiles | NAF domain profile. | 305 | 329 | IPR018451 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gma13g01466 | Gma-Chr13 | 29379054 | 29386721 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gma13g01466 | 1 | 372 | CBL-interacting serine-threonine protein kinases | AT5G35410 | 73.387 | 0.0 | 583 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CAMKL-CHK1 | Gma13g01466 | Pkinase | 4.8e-70 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gma13g01466 | - | - | gmx:100784786 | 890.182 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gma13g01466 | 13 | 29379054 | 29386721 | Gma13g01466 | 13 | 29379054 | 29386721 | ECH | |
Gma17g01070 | 17 | 9180164 | 9187873 | Gma13g01466 | 13 | 29379054 | 29386721 | GST |