Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01447 ATGGAGTCTCAGAGTCAGAGAGATCGCAGGACAGATGCTGTTGGAGACCTTCGAGTCCTTCCCGACGAAATCCTCTGCTCTATTTTAGAAGGTCTCACTCCCCGAGATGCTGCTCGCGTCGCTTGCGTTATCGGTGTGATGTACATTCTGTACAACGAAGACCCACTGTGGATGAGTCTATGCCGAAAAGGAGCATCTGGTTCTTGGAAGAAAACTGCCCTGCATAAGTATGTCTCTCCCCATATGCAATTGCTGGTTCTGAAATTGAATTATTCTCCTTTTTTGGTACATGATTTTAGTTTCTATTTAATGTTAACTTATTTGGAATTGGGCATTTTGAATGCAGTGAGACTCTGCCAGACAAATACAAAAGAGTACCATCGAGGACCTCTATATTTTGATGGGTTCAACTCTTTATTTTTGTACAGGAGATTATACCGCTGCCATACCACATTGGATGCATTTTTTGCCGATATTGGAAATGTGGAAAGAATAAAAGACATCTCACTCTTCTATAATGACTATGATGCAAAGAAACCGTGGTGTTGTTTTTCTCGAGTTTATTCTTCTTCTTTTTTTCCTTGTAAAGATGGAAAGTGGGAGATGAGAATACATTATCTTTTTAACAAAGGATCCTTTGCAGATGATAGGATTCTAGTTGTTATGCTCGCTGGATTGGCTGATACATGGCCTGCCAGGCGTAAATGGACAACTGATAAACTGTTGCTAAACTATGGAGATCATGATGGAGATCCCTTGTATATTTTTGATGAAAAGTTTGGCGAAACTGCACCTAGCTTATTGAAGGATTATTGTGTGCCTCATCTTTTTCAAGAAGACTTCTTTGATATCTTAGATACAGATAAACGACCATCCTATAGGTGGCTCATAATTGGACCAGAGAGATCTGGTGCCTCTTGGTATGTTGATCCAGCTCTTACCAGTGCATGGAATTCTCTTCTTTGTGGCCGTAAAAGCCAAGTTGAGTTTTTGTTATTGTTGACTTTGGACACAAGTGAGGGAAATAATGTTGCGAGTGAAGGGAGGGAAGAGACCACCTTGGGTGGGACTTGGAGCTGCAGTAGCCAGATTACCCTGCTTGGTGTTGCCAATGATATTGGTGAAAATGTTGGCATTCTTCCCGGTCTCGCCTGCAACAAGTTCCCTCCTTGGCTCATTCTCTTCATCGGTGCTCTTTTTTCTTTCCTTGGTTTTGGGGTTCTCTGGCTTGCTATCACTAAAACACTTGATTCTCTTCCCTTCATCTTGCTATGGTTTGCACTAGCTGTTGGTACTAACAGTTGTGCATGGTTATCTACTGCTATTCTTGTCACCAACATGAGAAATTTCCCTGTCAGTAGAGGCACAGTTGCGGGAATCCTGAAAGGTTATTCGGGACTCAGTGCTGCAGTTTTTACTCAAATTTACAGCGTGGTTTTTCACAATTCTTCATCCAAGTTCCTTTTATTTCTTGCCATTGGTATTCCTGCTTTATGCTTCAGTACCATGTTTCTTGTTCGGCCTTGTACTCCTGCTTCTGGTGAAGATTCTGCTGAAAAAGGGCATTTTTTGTTTATCCAAGGTGCTAGTGTGGCAATGGGTTTATATATTCTTGCTACAACAATACTTGACAACTTTATCCACATAAGTGACAGTGTTTCATATGCTTTGTTGGCCGTGATGATTCTCCTTCTCTTGGCTCCACTTGTTATCCCTACAAAGATGACACTATGTCCCAGAAAAGCCTCTAACACAGAAACCCCTGAGGAACATGTTGGATCTTCAGACTTTCTGGTTCAAGATGGCAAAGACAACATAGAGCCATTGCTATCATCTTCATCAGCTAGTGGTCTTGGAAGTTTTAATGATGTGGTGGATGGTTCAGCTGAGGTGGCTATGCTTCTTGCTGAGGGTGAGGGAGCAGTGAGGAAGAAGAGAAGGCCCAAAAGAGGGGAAGATTTTAAGTTTACTGAGGCTCTAGTTAAGGCAGATTACTGGTTACTGTTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGGTTACTGTTCTTAATAATCTGGCTCAAATAGGCATTGCACAAGGTATGGAAGATACAACAAACTTGCTGTCACTTTTCAGTTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAATATTTTGTCAGGACAAATACGATTCCAAGGACAATTTGGATGACATGCACGCAGATAATTATGATCTTCTCGTACCTTGTGTTTGCCTATGCCATCAAAGGAACCCTTTATCCTGCAATTGCAATTCTTGGTATCTGCTACGGCGTGCAGTTTTCCATAGTGATTCCCACTGTTTCGGAGCTTTTTGGTTTGAAAGACTTCGGTCTATTGAGCAACTTCATGGCTTTGGGGAACCCACTTGGTGCATTTCTTTTCTCTGCTCTTCTAGCAGGACATATATACGACAATGAGGCAGCAAAACAACACGGTGTAGGCCTCATTGCTTCAAGTGTTGCATGCATGGGTCCAAATTGTTTCAAGCTAACCTTTTTGACTCTGGCTGGTGTGTGTGTTGCGGGAACCATCTCCAGCATTATCTTGACCGTAAGAATTAAGCCCGTTTACCAAATGCTTTATGCCGGGGGTTCTTTTAAGCTACCTCAAACTTCAGGCCAGTAA 2661 0.4216 MESQSQRDRRTDAVGDLRVLPDEILCSILEGLTPRDAARVACVIGVMYILYNEDPLWMSLCRKGASGSWKKTALHKYVSPHMQLLVLKLNYSPFLVHDFSFYLMLTYLELGILNAVRLCQTNTKEYHRGPLYFDGFNSLFLYRRLYRCHTTLDAFFADIGNVERIKDISLFYNDYDAKKPWCCFSRVYSSSFFPCKDGKWEMRIHYLFNKGSFADDRILVVMLAGLADTWPARRKWTTDKLLLNYGDHDGDPLYIFDEKFGETAPSLLKDYCVPHLFQEDFFDILDTDKRPSYRWLIIGPERSGASWYVDPALTSAWNSLLCGRKSQVEFLLLLTLDTSEGNNVASEGREETTLGGTWSCSSQITLLGVANDIGENVGILPGLACNKFPPWLILFIGALFSFLGFGVLWLAITKTLDSLPFILLWFALAVGTNSCAWLSTAILVTNMRNFPVSRGTVAGILKGYSGLSAAVFTQIYSVVFHNSSSKFLLFLAIGIPALCFSTMFLVRPCTPASGEDSAEKGHFLFIQGASVAMGLYILATTILDNFIHISDSVSYALLAVMILLLLAPLVIPTKMTLCPRKASNTETPEEHVGSSDFLVQDGKDNIEPLLSSSSASGLGSFNDVVDGSAEVAMLLAEGEGAVRKKRRPKRGEDFKFTEALVKADYWLLFFVYFVGVGTGVTVLNNLAQIGIAQGMEDTTNLLSLFSFFNFVGRLGGGVVSEYFVRTNTIPRTIWMTCTQIIMIFSYLVFAYAIKGTLYPAIAILGICYGVQFSIVIPTVSELFGLKDFGLLSNFMALGNPLGAFLFSALLAGHIYDNEAAKQHGVGLIASSVACMGPNCFKLTFLTLAGVCVAGTISSIILTVRIKPVYQMLYAGGSFKLPQTSGQ 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01447 886 Gene3D Cupin 213 351 - -
Gma13g01447 886 SUPERFAMILY MFS general substrate transporter 378 510 IPR036259 -
Gma13g01447 886 SUPERFAMILY Clavaminate synthase-like 221 325 - -
Gma13g01447 886 SUPERFAMILY MFS general substrate transporter 531 867 IPR036259 -
Gma13g01447 886 SUPERFAMILY F-box domain 5 65 IPR036047 GO:0005515
Gma13g01447 886 CDD MFS_Mch1p_like 361 855 - -
Gma13g01447 886 Pfam Nodulin-like 362 572 IPR010658 -
Gma13g01447 886 PANTHER NODULIN-LIKE/MFS TRANSPORTER 362 885 - -
Gma13g01447 886 Gene3D MFS general substrate transporter like domains 617 862 IPR036259 -
Gma13g01447 886 ProSiteProfiles F-box domain profile. 14 60 IPR001810 GO:0005515
Gma13g01447 886 Gene3D - 3 81 - -
Gma13g01447 886 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 362 885 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01447 Gma-Chr13 29213258 29224467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01447 361 886 Nodulin-like Gene Family AT1G80530 55.114 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01447 - - gmx:100808992 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01447 13 29213258 29224467 Gma13g01447 13 29213258 29224467 ECH
Gma17g01003 17 8569708 8572871 Gma13g01447 13 29213258 29224467 GST
Gma13g01447 13 29213258 29224467 Gma15g01885 15 24134641 24138498 PCT
Gma13g01447 13 29213258 29224467 Gma09g00853 09 12602372 12606182 PCT
Gma15g01885 15 24134641 24138498 Gma13g01447 13 29213258 29224467 PCT
Gma09g00853 09 12602372 12606182 Gma13g01447 13 29213258 29224467 PCT