Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01433 ATGGGAGCAGTGATTCTCCCAGATCTCGGCACCGAGATTTTGATTCCGGTCTGCGCCATCATTGGAATAGGGTTCGCCCTCTTCCAGTGGGTCCTCGTCTCCAAGGTTAAGCTCTCCGCTGCCAGAGACGCTTCCCCTAACGCCGCCGGCAAAAATGGCTACAACGATTACCTCATCGAAGAAGAGGAAGGCCTCAACGATCACAACGTTGTCCTCAAATGCGCCGAAATCCAAAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTCACTGAATACAAGTATGTGGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTATTCCTTGGCTCTGTGGAAGGATTCAGCACGAGCTACCAGCCTTGCACCTATGATCAAACTAAAATGTGTAAGCCAGCTCTTGCTACTGCTGTTTTCAGCACCATATCTTTCCTGCTTGGTGGTGTCACATCGCTTATTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCCTGGAGGCAAGAAAGGGTGTTGGGAAGGCTTTCATTACGGCTTTTAGATCTGGTGCAGTTATGGGTTTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTACATTGCCATCAACTTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGAAAGGTTGAAAGAAACATCCCCGAAGATGATCCAAGAAATCCAGCTGTGATTGCTGATAATGTTGGTGATAATGTTGGGGATATCGCTGGTATGGGATCTGATCTTTTTGGTTCATATGCCGAGTCATCCTGTGCTGCTCTTGTTGTTGCTTCCATCTCTTCTTTTGGGGTGAATCATGAGTTGACTGCTATGTTATACCCTCTCATTATCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACAACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTAAAGGAGATTGAGCCTGCATTGAAGAAACAACTCATCATTTCCACTGCCCTGATGACTATTGGGATTGCAATTGTTAGTTGGATTGCACTCCCAACTTCCTTCACTATCTTCAATTTTGGAGTTCAGAAAGATGTCAAGAATTGGCAGCTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGTCTTATTATTGGATTTGTAACTGAGTACTATACTAGCAATGCATATAGTCCGGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTGGGATACAAGTCTGTTATTATTCCAATTTTTGCTATTGCCATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCTGTTGCTGCGCTTGGCATGCTGAGTACCATTGCCACCGGATTGGCCATTGATGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAAATGGCTGGTATGAGTCACAGAATTAGAGAGAGAACTGATGCCCTTGATGCTGCCGGAAACACGACTGCCGCTATTGGGAAGGGATTTGCCATTGGTTCTGCTGCCCTTGTATCACTGGCCCTCTTTGGTGCCTTTGTGAGCCGAGCTGCTATTACAACTGTTGATGTGTTGACTCCAAAGGTTTTCATTGGTTTGATTGTGGGTGCAATGCTTCCTTACTGGTTTTCTGCTATGACTATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAAGAAGTACGCAGGCAATTCAACACCATTCCAGGGTTGATGGAGGGAACTGCTAAGCCTGACTATGCCACATGTGTTAAGATCTCCACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCGCTTGTTGTTGGAATCCTTTTTGGTGTTGAAACACTTTCTGGTGTCCTAGCTGGATCTTTGGTGTCTGGTGTACAGATTGCTATTTCTGCATCCAACACCGGTGGTGCTTGGGATAATGCCAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCAAGAAGCCTTGGTCCAAAAGGGTCAGATTGTCACAAGGCAGCTGTTATTGGTGACACCATTGGAGACCCTCTAAAGGATACATCTGGACCTTCACTTAACATCCTTATTAAGCTCATGGCGGTTGAGTCTCTTGTGTTTGCTCCCTTCTTTGCTACACATGGTGGCCTACTCTTCAAGATCTAA 2298 0.453 MGAVILPDLGTEILIPVCAIIGIGFALFQWVLVSKVKLSAARDASPNAAGKNGYNDYLIEEEEGLNDHNVVLKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSYQPCTYDQTKMCKPALATAVFSTISFLLGGVTSLISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLIISSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLIISTALMTIGIAIVSWIALPTSFTIFNFGVQKDVKNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKI 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01433 765 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma13g01433 765 Pfam Inorganic H+ pyrophosphatase 43 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma13g01433 765 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP 1 765 - -
Gma13g01433 765 PIRSF H+-PPtase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma13g01433 765 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gma13g01433 765 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01433 Gma-Chr13 29116033 29120819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01433 5 629 Primary Pumps ATPases AT1G15690 87.739 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01433 K23025 - gmx:100775864 1467.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01433 13 29116033 29120819 Gma13g01433 13 29116033 29120819 ECH
Gma17g01020 17 8678683 8682856 Gma13g01433 13 29116033 29120819 GST