Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01345 ATGGCCACTTGTGTGTCAACAATTTTTGCACCATCTAATACTAGAAATTCCGCAAGGGTGCTTTCTGTTGGAGGAACAAATCTCACTTGGAATTATCCTGGGAGAGCTTGTTTTACGAAAATGTATGACCGCAGGAATGGGTTTTCTGGTGGCATCCAGATGTCGGGTTTACTTCAAGTTAAGTGTTCAGCCAATTCGCACAGTGTAAGTCCATATAATAATAGCCAAGGTCCTTTTCTAGATTTACATCCTGAGGTGTCAATGCTTAGAGGAGAAGCGAGCAGTACAGTGAACAGCCCTAGAAAGGATAGCTCAGGTGGGGATTTATCTGAGAGCCTGGGAACTACATCTAGTCAAAGTGATTACAATGAAGCAAAGATCAAAGTTATTGGTGTTGGAGGTGGTGGGTCAAATGCAGTCAATCGCATGATAGAGAGCGAAATGCATGGCGTGGAGTTTTGGATTGTTAATACTGATGTTCAAGCCATGAGAATGTCACCTGTCTATCCTGAGAACCGTTTGCAAATTGGTCAAGAGCTTACACGAGGTCTTGGTGCTGGTGGTAACCCTGAGACTGGAATGAATGCTGCGAAAGAAAGCAAAGAATCAATAGAAGAGGCAGTCTATGGAGCCGATATGGTCTTTGTTACTGCTGGAATGGGTGGGGGAACTGGCACAGGTGGTGCTCCAATTATTGCTAGTATTGCAAAGTCAATGGGTATACTGACGGTTGGTATTGTCACCACCCCCTTCTCGTTTGAAGGGAGAAAGAGAGCTATTCAAGCCCAAGAAGGAATTACAGCCTTAAGAGATAATGTTGACACACTTATAGTTATTCCAAATGACAAGCTACTAACAGCAGTTTCTCAATCTACCCCTGTAACTGAAGCATTCAATCTGGCTGATGATATTCTTCGACAGGGTGTTCGTGGCATATCTGATATTATTACGATACCAGGGTTGGTGAATGTAGATTTTGCTGATGTTCGAGCTATAATGGCCAATGCAGGTTCTTCACTAATGGGGATAGGAACTGCAACTGGGAAATCAAGGGCAAGAGATGCTGCATTAAATGCCATCCAGTCACCTTTACTGGATATTGGTATAGAGAGGGCTACTGGAATTGTTTGGAACATAACTGGTGGGACTGATCTGACCTTGTTTGAGGTAAACACGGCAGCAGAGGTTATATATGACCTCGTGGACCCTACTGCTAATTTAATATTTGGAGCAGTAATAGATCCATCACTCAGTGGTCAAGTGAGCATAACATTGATTGCAACTGGGTTCAAGCGTCAAGAGGAGAGCCAAGGGAGGCCTCTGCAGGTCAGTCAACTCACTCAAGCGGATACAACCTATGGCACCAACCGGCGGTCTTCCTCTTTCGCTGATGGTGGTTTGTTTGAGATACCAGAATTCCTAAAGAAGAAAGGAGGAGGTTCACGCTATCCAAGGGCGTAA 1461 0.4435 MATCVSTIFAPSNTRNSARVLSVGGTNLTWNYPGRACFTKMYDRRNGFSGGIQMSGLLQVKCSANSHSVSPYNNSQGPFLDLHPEVSMLRGEASSTVNSPRKDSSGGDLSESLGTTSSQSDYNEAKIKVIGVGGGGSNAVNRMIESEMHGVEFWIVNTDVQAMRMSPVYPENRLQIGQELTRGLGAGGNPETGMNAAKESKESIEEAVYGADMVFVTAGMGGGTGTGGAPIIASIAKSMGILTVGIVTTPFSFEGRKRAIQAQEGITALRDNVDTLIVIPNDKLLTAVSQSTPVTEAFNLADDILRQGVRGISDIITIPGLVNVDFADVRAIMANAGSSLMGIGTATGKSRARDAALNAIQSPLLDIGIERATGIVWNITGGTDLTLFEVNTAAEVIYDLVDPTANLIFGAVIDPSLSGQVSITLIATGFKRQEESQGRPLQVSQLTQADTTYGTNRRSSSFADGGLFEIPEFLKKKGGGSRYPRA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01345 486 ProSitePatterns FtsZ protein signature 2. 212 233 IPR020805 GO:0005525
Gma13g01345 486 Gene3D - 336 445 IPR037103 -
Gma13g01345 486 Hamap Cell division protein FtsZ [ftsZ]. 122 438 IPR000158 GO:0003924|GO:0005525
Gma13g01345 486 Pfam Tubulin/FtsZ family, GTPase domain 126 287 IPR003008 GO:0005525
Gma13g01345 486 CDD FtsZ_type1 137 429 IPR000158 GO:0003924|GO:0005525
Gma13g01345 486 SMART Tubulin_C_4 322 439 IPR018316 -
Gma13g01345 486 Gene3D Tubulin/FtsZ, GTPase domain 115 335 IPR036525 -
Gma13g01345 486 TIGRFAM ftsZ: cell division protein FtsZ 117 442 IPR000158 GO:0003924|GO:0005525
Gma13g01345 486 Pfam FtsZ family, C-terminal domain 337 431 IPR024757 -
Gma13g01345 486 SMART Tubulin_4 126 320 IPR003008 GO:0005525
Gma13g01345 486 MobiDBLite consensus disorder prediction 90 118 - -
Gma13g01345 486 SUPERFAMILY Tubulin nucleotide-binding domain-like 125 323 IPR036525 -
Gma13g01345 486 PRINTS Cell division protein FtsZ signature 213 233 IPR003008 GO:0005525
Gma13g01345 486 PRINTS Cell division protein FtsZ signature 241 262 IPR003008 GO:0005525
Gma13g01345 486 PRINTS Cell division protein FtsZ signature 304 326 IPR003008 GO:0005525
Gma13g01345 486 PRINTS Cell division protein FtsZ signature 327 348 IPR003008 GO:0005525
Gma13g01345 486 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 483 - -
Gma13g01345 486 MobiDBLite consensus disorder prediction 91 118 - -
Gma13g01345 486 SUPERFAMILY Tubulin C-terminal domain-like 319 433 IPR008280 -
Gma13g01345 486 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 483 IPR045061 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01345 Gma-Chr13 28121024 28127893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01345 216 424 PP2C-type Phosphatase Gene Family AT1G75010 24.324 3.60e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01345 K03531 - gmx:100791477 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01345 13 28121024 28127893 Gma13g01345 13 28121024 28127893 ECH