Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01331 ATGGCTTCTTCTAATAGACACTGGCCAAGCATGTTCAAGTCCAAGCCCTGCAACCCTCACCACCAATGGCAGCATGACATCAACTCCTCCCTCATCTCCACTAGCTGCCACAGAAGCCCTTACTCTTCCGGAGGTGGTGGTTGTGAggagagaagtccagagccaaagccaaggtggaacccaaaacctgagcaaatccgaatactggaggctatattcaactcTGGAATGGTGAATCCTCCGAGGGATGAGATAAGGAAGATAAGGGCACAGTTGCAAGAGTATGGGCAAGTGGGTGATGCCAATGTCTTCTATTGGTTCCAGAACCGCAAGTCCAGGAGCAAGCACAAGCTTCGCCATCTCCAAAACTCATCATCAAAGAACCTGAACCACCATCACCACCTTGTTGATCAAAATCATCATACTCCCACTTCTCTCCCTCAAACCGCTACTACTGCACCCTCATCCTCATCATCTTCATCGTCTGAGAAATCTTCCCCAAAAGAGCTTATAATACCTACCACCAAGGTGTTCTCCATTGGATTCTCCGATGTGATGCCTAATTCTCCCACTGCTTCTGTGAACCAGACCTATTTTCAGACCCGAATTAATGAGTCCATTATGCTTCCGTCACCACCACCACCAGTTGAGGCTTTCTTCTTCCCAGTGCAACAACAACATCATGGAGTAACATCATCATCACAAGGGTTTTGCTTCTCTGAGCTGTCCAATGTTGTTCATCAACACAACAGCGTTGGTCCTTGCACTAGCCTCTTGCTTAGTGAGATCGTAGGCCATGGTGTTGCTTCTGCTTCTGCCTCAAAGAAAGACAAGTCTCAGGTGAAAATAATGCACCAGCCCTCACTGCTTAATTTCTGTGTCACCACTCCAACAACAACAGCTCCTTCTACTACAACCACTGTTGTTGTACCTCCCATCACTACTACCTCCTCTACTACTGTTCCATCCCCCCTCATGCATCAACTTCAAGGTATTGGAGATCCAGGTGGTGCGGCGAGATCAATGGTGTTCATTAACGATGTGGCATTCGAGGTGGCTTTGGGGCCCTTCAATGTGCGTGAAGCCTTTGGAGATGATGCTGTGCTCATCCATGCCAGCACTGGTCAACCTGTGCTAACAAACCAATGGGGTCTCACTCTTCATTCACTCCAGCATGGCGCTTGTTATTATTTGATATAG 1200 0.4475 MASSNRHWPSMFKSKPCNPHHQWQHDINSSLISTSCHRSPYSSGGGGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLQNSSSKNLNHHHHLVDQNHHTPTSLPQTATTAPSSSSSSSSEKSSPKELIIPTTKVFSIGFSDVMPNSPTASVNQTYFQTRINESIMLPSPPPPVEAFFFPVQQQHHGVTSSSQGFCFSELSNVVHQHNSVGPCTSLLLSEIVGHGVASASASKKDKSQVKIMHQPSLLNFCVTTPTTTAPSTTTTVVVPPITTTSSTTVPSPLMHQLQGIGDPGGAARSMVFINDVAFEVALGPFNVREAFGDDAVLIHASTGQPVLTNQWGLTLHSLQHGACYYLI 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01331 399 MobiDBLite consensus disorder prediction 140 168 - -
Gma13g01331 399 SMART HOX_1 54 121 IPR001356 GO:0003677
Gma13g01331 399 Pfam Homeodomain 56 116 IPR001356 GO:0003677
Gma13g01331 399 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 399 - -
Gma13g01331 399 CDD homeodomain 55 117 IPR001356 GO:0003677
Gma13g01331 399 MobiDBLite consensus disorder prediction 34 61 - -
Gma13g01331 399 Gene3D - 56 122 - -
Gma13g01331 399 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 399 IPR044557 GO:0003700|GO:0050793
Gma13g01331 399 MobiDBLite consensus disorder prediction 137 168 - -
Gma13g01331 399 ProSiteProfiles 'Homeobox' domain profile. 52 117 IPR001356 GO:0003677
Gma13g01331 399 SUPERFAMILY Homeodomain-like 52 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01331 Gma-Chr13 27840584 27842808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01331 1 399 Wox Gene Family AT2G33880 45.540 4.48e-93 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma13g01331 Homeodomain 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01331 - - gmx:100785125 698.353