LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gma13g01319	ATGAAGAAAATTTCCAAGAGCAGCTGCAAGTTAGCATCACACAGGCTCTTTAAGGACAAGGCAAGGAACCATGTTGATGATCTGCAGGTGATGTTCTTGGATCTGCAGTTTGCCAGAAAGGAGAGCCGTACTATTGATGCTGCACTTCTGGAGGAGCAAGTCCATCAGATGCTTCGTGAGTGGAAGGCTGAGCTTAACGAGCCATCTCCTGCTTCCTCTTTGCAGCAAGGTGGCAGTCTTGGTTCATTCTCTACCGATGTCTATAGGCTATTGCAGCTCTGTGAGGAGGAAGATGATGCCACTAGTCCATTAGTTGCACCTAAGCCTGAACCTAATGATCAGATTATGCAGGCTGGGGCTAAGGTGATAGTCCAAGAGGGTCAACATCAACAGGAATTACTATTACTTAAGGAATGCAAACCCTTCACTGTAGGATTTCCCAACTTGGATGGAACTGCTTTAGAGTATCACCAATTTGATATCAATAAGGATATGGATGACAGCTTCTATGCTGGTACAGGTTTTTGTGAGGAAGGTCGTGTTCCTCACATATCTAGCTATCTGCCAAGTGTGTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGCGCACTTTGGGACTGTCCAAGACCAGTTCAAGGCTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCACGCCGCTCTAGCTTTAAACGAAGGACCACCAGGGATGACCCCAGTTCTAAGACCTGGGGGAATTGGACTCAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGGAAAAGTTGTTGGAATCCCAGAATGTGAGGGAGCAGCAACCGCAAAATCTCCATGGAATGCACCTGAGCTCTTTGATATATGTGTTCTAGAGGGTGAGACTATTAGGGAGTGGCTATTCTTTGATAAGCCTAGAAGGGCATTTGAGAGTGGAAACAGAAAGCAGAGGTCACTGCCGGATTATAGCGGGCGTGGATGGCACGAGTCTAGAAAGCAAGTGATGAACGAATTTGGAGGGCTGAAGAGATCCTATTACATGGACCCTCAACCTTTGAACCTTTTTGAGTGGCACCTTTATGAGTATGAAATTAGCAAGTGCGATGTGTGCGCCTTATACCGGTTGGAACTAAAGCTGGTCGATGGGAAGAAGAGCTCCAAGGCAAAGATAGTAACAGGTGATTCAGTTGCTGATCTTCAGAAGCACATGGGAAGCCTCTCTGCCAAAGGAACAAGACAAGGTGATTTTTTATCCTTGTCAAGACATTGTGAATAG	1281	0.4598	MKKISKSSCKLASHRLFKDKARNHVDDLQVMFLDLQFARKESRTIDAALLEEQVHQMLREWKAELNEPSPASSLQQGGSLGSFSTDVYRLLQLCEEEDDATSPLVAPKPEPNDQIMQAGAKVIVQEGQHQQELLLLKECKPFTVGFPNLDGTALEYHQFDINKDMDDSFYAGTGFCEEGRVPHISSYLPSVCPPPSAFLGPKCALWDCPRPVQGLDWCQDYCSSFHAALALNEGPPGMTPVLRPGGIGLKDNLLFAALSAKAQGKVVGIPECEGAATAKSPWNAPELFDICVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNLFEWHLYEYEISKCDVCALYRLELKLVDGKKSSKAKIVTGDSVADLQKHMGSLSAKGTRQGDFLSLSRHCE	426

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gma13g01319	426	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	413	IPR039277	GO:0006355\|GO:0048578
	Gma13g01319	426	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	413	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gma13g01319	Gma-Chr13	27751153	27753509	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gma13g01319	3	411	VOZ-9 Transcription Factor Family	AT1G28520	72.577	0.0	619

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Gma13g01319		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gma13g01319	-		-	gmx:100784593	827.394