Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01315 ATGAAGGTGGTCGCCGCGTATTTGCTCGCCGTCCTCGGTGGCAACAACAGCCCCTCCGCCGATGTCATCAAGGAAATCCTTGGCTCCGTTGGAGTAGAAGCAGATGAAGATAGGATTGAATCGTTTTTGTctgaagttaagggtaaggatatagttgagcttattgctgccggtagggaaaagttggccacggttccttctggtggtggtggtgccgttgccgtcgccgcagctcctgggggaggtgctgctgctgctgctcctgctgctgaggcAAAGAAGGAGGAAAAGGTGGAGGAGAAAGAGGAATCTGATGATGATATGGGTTTCAGTCTCTTCGATTAA 345 0.2783 MKVVAAYLLAVLGGNNSPSADVIKEILGSVGVEADEDRIESFLSEVKGKDIVELIAAGREKLATVPSGGGGAVAVAAAPGGGAAAAAPAAEAKKEEKVEEKEESDDDMGFSLFD 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01315 114 Gene3D - 1 59 IPR038716 -
Gma13g01315 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P2-1 1 114 - -
Gma13g01315 114 MobiDBLite consensus disorder prediction 85 114 - -
Gma13g01315 114 Hamap 50S ribosomal protein L12 [rpl12]. 2 114 IPR027534 GO:0003735|GO:0005840|GO:0006414
Gma13g01315 114 Pfam 60s Acidic ribosomal protein 17 113 - -
Gma13g01315 114 CDD Ribosomal_P2 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gma13g01315 114 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 114 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01315 Gma-Chr13 27692767 27694341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01315 1 114 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.035 7.20e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01315 K02943 - gmx:100499761 154.066