Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01313 ATGGGTTCATTCTCTGGCACTTGTGAAATTGTCGAAGTAAGGGAAGACCTAAATACAGAGAAACATGCAGGTATATGTCAGTCCAATTCTGGATATAGCTTGGATGAGAAAAATCAGAAGCATCCTGTGCAGAAACTGGGATATAAGGGTAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTACTCTTAAATCTTCATCAAGGGATTTAGGCATTTTACAAGATGGTACAAGCCCTAAGATGAAAAGTGCATTCAAAAAACCAACTACAGTGGGTGCTTCTCGGTCCCCACGGATTGGACCTTCTGAGCCTGTTACTTTGAAGCAGGCATTAAGAGACCTATGTATATCTAAGGCATCAGAAATGGCTGCCATGAAAAGATTATCAAAGTCAACTGCTTCTCCACGAATATCTGAGGTTGGGAAGATACAGACATTGTACAACTCAGTTGTAGTTGAAGGTAGACGATCTGGGCCTTCTAATGCTGAGAGTAAAGGGAGTACAAGTGAAATATCTCTAGTGCCAGAAGAGAGCAACTCACTTTCCTTGGATAATGCTTCCCAGTCTCATCCAACTGTTAAAAGCACTTCACTGAGCCCAAATGTTCAATCTTCCAAAATTGCTGCTGCAATTGCAACTACACAAAATGATACTGGGGCTTCATTGATGCCAAGTGACTTGGCTAGTTCATCAAGTAAAGTTGGGGTTCTATCACAGTCATCAGAGCCTGCTCAAATAGAAAAACAAACATCTGAATCTTCTTCATCTAGTTGTAACACCAATGGAAGTAAATTAGAGTTTCCCGAAAATGCTTCTTCCCCTAAAAAGATAGGAAATAAAGCCTCTGCATCAAACAGTGGGCGGAAAGGTAGGTTACAAACAGTCTCTTCCTCATCTACTTCAGTAAATGGCAATAGAGTGTGCAAACTGTCACGCAATGCCCCTCGTACAGTTAAATCATTTATCAAGAACAAAAAATTTGGAAAGAAAAAAGTAAAGCAGGATTCAGTTTCTGCTTTATTTGATCCTACATCCAATGAAGTAAATAACAAGTCAGTTTCTGGTACAACTCAACTTGTTTGTGAGAGATGTTGGTGTGCTATTGAAAACAACGAAGGTGTTACATCATTGGACTCTCTCAGTCCTGGAGAGGGAATAAACTCTGTTAATGTGCACTCTGGCGCAGCATCAGCTGGCTGTAATAGCAGCAGAGAAGTTACAAAAGTGAAAAAGAACACCGTATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGCCAAGGTGACTACAGTAGTAGTACAAGTACCAGTGATGAGAGTAATCTCAGTGGGTCTAGTTGTGGCAATAGGCCTCACATGTCGAAGGATGTTAGATGGAAAGCCATAAGACATGCTCAAATGCAGCATGGAGTCTTGGGCTTGAGACACTTCAATCTTTTGAAGAAGCTAGGTTGTGGAGACATTGGGACTGTATATCTTGCTGAACTAATTGGCAAAAATTGTTTGTTTGCTATTAAGGTGATGGACAATGAATTTTTGGCAAGAAGGAAGAAGACGCCTAGGGCTCAAACAGAAAGAGAAATATTGAGGATGCTGGATCATCCTTTTCTTCCAACACTGTATGCTCAGTTTACATCAGATAATTTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGTGATCTTCATGTTCTACGGCAGAAGCAGCTTGGCAGAAGTTTTTCAGAGCCAGCAGCTAGGTTTTATGTTgccgaagtccttcttgctttggagtacttgcacatgcttggagtggtttaccgtgatttgaaacctgaaaacattctcgttcgagaagacggccacatTATGCTCACAGATTTTGATCTGTCGCTAAGGTGTGATGTTAGCCCAACACTTCTGAAGTCATCTTCTGATGTGGATCCTGCTAAGATTTCTGGTCCTTGTGCACAATCAAGTTGCATTGAGCCATTCTGTATTGAACCAGCCTGTCAAGTTCCGTGCTTCAGCCCAAGAATCCTGCCTCCTGCCGCAAAAGCAAGGAAATTAAAAACTGATCTTGCTGCTCAGCTCAGATCGTTGCCACAGCTTGTGGCTGAGCCCACAGATGCAAGATCAAATTCATTTGTTGGTACTCATGAATACTTGGCGCCTGAGATCATCAAAGGAGAGGGACATGGAGCGGCAGTTGACTGGTGGACATTCGGTGTTTTTCTGTATGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCCAACGTGGTGTTGCAAGGTCTCAGATTCCCTGACACCCCATTTGTTAGTATCCAAGGGAGGGATCTCATTAGAGGGTTGTTGGTTAAAGAGCCTGAAAATCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATAAAACAGCACCCCTTCTTTGAAGGCCTGAATTGGGCATTAATACGTTGCGCTATCCCACCAGAACTGCCAGACTTACGTGAATTTGGAGTTTCAGAGATGACCCTACAGTCCCAGGGCAAGGGTGTTAAGTATGTAGAGTGTAATGCAGCAGGAGAGCTAGTGGAATTTGAGTTGTTTTGA 2601 0.4022 MGSFSGTCEIVEVREDLNTEKHAGICQSNSGYSLDEKNQKHPVQKLGYKGNLDDDINKLFESITLKSSSRDLGILQDGTSPKMKSAFKKPTTVGASRSPRIGPSEPVTLKQALRDLCISKASEMAAMKRLSKSTASPRISEVGKIQTLYNSVVVEGRRSGPSNAESKGSTSEISLVPEESNSLSLDNASQSHPTVKSTSLSPNVQSSKIAAAIATTQNDTGASLMPSDLASSSSKVGVLSQSSEPAQIEKQTSESSSSSCNTNGSKLEFPENASSPKKIGNKASASNSGRKGRLQTVSSSSTSVNGNRVCKLSRNAPRTVKSFIKNKKFGKKKVKQDSVSALFDPTSNEVNNKSVSGTTQLVCERCWCAIENNEGVTSLDSLSPGEGINSVNVHSGAASAGCNSSREVTKVKKNTVLKEQLEFSQSSKSSQGDYSSSTSTSDESNLSGSSCGNRPHMSKDVRWKAIRHAQMQHGVLGLRHFNLLKKLGCGDIGTVYLAELIGKNCLFAIKVMDNEFLARRKKTPRAQTEREILRMLDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCDVSPTLLKSSSDVDPAKISGPCAQSSCIEPFCIEPACQVPCFSPRILPPAAKARKLKTDLAAQLRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQGLRFPDTPFVSIQGRDLIRGLLVKEPENRLGSEKGAAEIKQHPFFEGLNWALIRCAIPPELPDLREFGVSEMTLQSQGKGVKYVECNAAGELVEFELF 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01313 866 MobiDBLite consensus disorder prediction 422 454 - -
Gma13g01313 866 Gene3D Transferase(Phosphotransferase) domain 1 706 831 - -
Gma13g01313 866 CDD STKc_phototropin_like 479 836 - -
Gma13g01313 866 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 866 - -
Gma13g01313 866 MobiDBLite consensus disorder prediction 277 308 - -
Gma13g01313 866 MobiDBLite consensus disorder prediction 157 204 - -
Gma13g01313 866 Gene3D Phosphorylase Kinase; domain 1 479 560 - -
Gma13g01313 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Gma13g01313 866 SUPERFAMILY Protein kinase-like (PK-like) 455 831 IPR011009 -
Gma13g01313 866 MobiDBLite consensus disorder prediction 80 105 - -
Gma13g01313 866 ProSiteProfiles Protein kinase domain profile. 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01313 866 Gene3D Transferase(Phosphotransferase) domain 1 561 629 - -
Gma13g01313 866 Pfam Protein kinase domain 482 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01313 866 Pfam Protein kinase domain 710 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01313 866 MobiDBLite consensus disorder prediction 422 456 - -
Gma13g01313 866 MobiDBLite consensus disorder prediction 235 308 - -
Gma13g01313 866 PANTHER FLIPPASE KINASE 1-RELATED 1 866 - -
Gma13g01313 866 SMART serkin_6 481 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01313 866 MobiDBLite consensus disorder prediction 235 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01313 Gma-Chr13 27651101 27655586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01313 1 866 AGC Kinase Gene Family AT2G36350 51.405 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gma13g01313 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01313 - K08286 gmx:100813470 1631.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00622 10 6733738 6736891 Gma13g01313 13 27651101 27655586 GST
Gma19g01649 19 45881081 45882428 Gma13g01313 13 27651101 27655586 PCT
Gma03g01603 03 42243792 42245150 Gma13g01313 13 27651101 27655586 PCT
Gma19g01820 19 47494460 47497884 Gma13g01313 13 27651101 27655586 PCT
Gma03g01774 03 43875555 43878955 Gma13g01313 13 27651101 27655586 PCT
Gma13g01313 13 27651101 27655586 Gma19g01820 19 47494460 47497884 PCT
Gma13g01313 13 27651101 27655586 Gma03g01774 03 43875555 43878955 PCT