Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01309 ATGGCAACCTTGTTTAACAAGCTAGTGCTCACAGGCTACTTGGTTCCAGATTATTATACTAGTCAGCAGTTGACTAAAAAGAGTGATGTCTATAGTTTTGGAGTGCTAATGCTAAAGTTGATTATTGCAAGAAAGCCAATAGAACAAGGGAAATATATTATGAAAGTGGTCACAAGTACAATAGATAAGACAAAAGACTTATATGGTCTTCATGAAATTATTGACTCGACCATCTGTTCAAGATCAACACTTGAGCGTTTTGAGAAGTTAGTGGACCTTGCAATGGAGTGTGTTGAAGATTCAGGAGTTGACATGCTCACAATGAGTGATGTGGTTAAAGAAATTGAAGGCATGTTGTAG 360 0.3694 MATLFNKLVLTGYLVPDYYTSQQLTKKSDVYSFGVLMLKLIIARKPIEQGKYIMKVVTSTIDKTKDLYGLHEIIDSTICSRSTLERFEKLVDLAMECVEDSGVDMLTMSDVVKEIEGML 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01309 119 PANTHER RECEPTOR-LIKE PROTEIN 55 12 117 - -
Gma13g01309 119 PANTHER - 12 117 - -
Gma13g01309 119 Gene3D Transferase(Phosphotransferase) domain 1 4 119 - -
Gma13g01309 119 SUPERFAMILY Protein kinase-like (PK-like) 11 116 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01309 Gma-Chr13 27622306 27623353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01309 12 119 Receptor kinase-like Gene Family AT5G49760 51.376 2.05e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Gma13g01309 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01309 - - gmx:100810323 173.711