Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01308 ATGGCGGAGAAGCACTTGCGGGAGCTCCTTAAAGAGGATCAAGAACCCTTCCTTCTGAAACACTACATTTGGGAGCGTCGCAGGCAGCTCAAAAGACCTTCCCCAAACAGCCCTTTACAACAACAACTGAAAAAGAAAAACTCAAACTTCCCACTTAACAAATGCTTCCTCACTTCCCTACAAAACGCCACAAAATCCCCACTCTTATTGTCTCCAAAGAATAGTACTTCTCCCCTCCTCAGACCCTCCAACGCCAAAACCGCGTCGCTCCTCCTCGAAGCCGCCCTCAGAATCCACAACAAAAACGCGAAACCGAAGAAGCCCAAACCAAACAGCGCCTTGGGCATCTTCGGCTCGCTCTTCAAGAAACTAACCAACCGAAAGAGGGAAACATTAGAGGGTGTTCTTGTTAAGGTTAAAGACAGCGACGACGATGTTGTTGTGGTGGGATCCTGTGAGGTCGGGTTCAGTTGTTCCTGCAACGGAAGGCCAAGCAGTGCTGTGTGGTCGGAGAGCAACGAGGATAAATCGTTGGACTTGGAATCTTCTAGTAGTGGCCACTCATTTGATGACTCTGTTGCTGAAGAGATTGAGTTTCTCAACAAACGCAAACATGTTACGGATTCTGCTTGTTTTGACGACGATGATGATCACGGCTTCTTCTGTGAAAGCCCGTTCCGTTTCTCCCTCCAACGCAGCCCCGGCTACTCCGGCCGCCACACCCCGGATTTTTCTTCGCCGGCTGCGTCTCCATGTCGCCGCAAAACTGAGGACAAAAAAATTAATGGTGCTGATGGCGTCAACAAATTCCAATCAGGGGAAGAAGAGGAAGATAAGGAACAGTGCAGTCCAGTATCTGTTTTAGACCCACCCTTCGATGACGATGATGATGGGCATGATGATGACCATGAAGGGGATGGTTTTGATTTGGACTGTAGCTATGCCAATGTACAAAGAACTAAGCAGCATCTACTAAACAGACTTCGTAGATTCGAGAAACTTGCCGAGTTAGATCCGGTAGAACTTGAGAAGAGAATGCTGGATCAAGACCGCGAGTACAAAACATTTACTGAAGAGGACGATGATTGTGAAGACGGCGACAGCGAAACAGCATGCAAAGAAAATGCTCTGAGAGGAGAATTAATGTTTGAAATCCTCTGCCATTCAAGTGTTGAAGACACACAACAGCAAACTCCAGAAGACCTCAAGAGGCTGGTCTATGATCTCATCAAGGAGGAAGAGAGGGAAGTTAATAATTCTTCAgacatggtgataagaagggttcttaggaggctagaattgtggaaagaagtggagtccaacactattgatatgatgatagaagaggacttctctagagagcaatgcaggtggaagaaaaatgctgagcacacaagtgagctagctgtggaacttgaacttgctatcttttgctttctagtggaggagctttcagaggaactagtgtgttaa 1473 0.4067 MAEKHLRELLKEDQEPFLLKHYIWERRRQLKRPSPNSPLQQQLKKKNSNFPLNKCFLTSLQNATKSPLLLSPKNSTSPLLRPSNAKTASLLLEAALRIHNKNAKPKKPKPNSALGIFGSLFKKLTNRKRETLEGVLVKVKDSDDDVVVVGSCEVGFSCSCNGRPSSAVWSESNEDKSLDLESSSSGHSFDDSVAEEIEFLNKRKHVTDSACFDDDDDHGFFCESPFRFSLQRSPGYSGRHTPDFSSPAASPCRRKTEDKKINGADGVNKFQSGEEEEDKEQCSPVSVLDPPFDDDDDGHDDDHEGDGFDLDCSYANVQRTKQHLLNRLRRFEKLAELDPVELEKRMLDQDREYKTFTEEDDDCEDGDSETACKENALRGELMFEILCHSSVEDTQQQTPEDLKRLVYDLIKEEEREVNNSSDMVIRRVLRRLELWKEVESNTIDMMIEEDFSREQCRWKKNAEHTSELAVELELAIFCFLVEELSEELVC 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01308 490 MobiDBLite consensus disorder prediction 290 304 - -
Gma13g01308 490 PANTHER OS04G0572500 PROTEIN 1 490 - -
Gma13g01308 490 MobiDBLite consensus disorder prediction 233 307 - -
Gma13g01308 490 MobiDBLite consensus disorder prediction 252 283 - -
Gma13g01308 490 PANTHER - 1 490 - -
Gma13g01308 490 Coils Coil 314 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01308 Gma-Chr13 27595335 27599736 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01308 3 489 TRM (TON1 Recruiting Motif) Superfamily AT2G36420 30.930 4.06e-31 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01308 - - gmx:100782984 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01308 13 27595335 27599736 Gma13g01308 13 27595335 27599736 ECH
Gma10g00619 10 6695305 6699499 Gma13g01308 13 27595335 27599736 GST
Gma19g01814 19 47395650 47403517 Gma13g01308 13 27595335 27599736 PCT
Gma03g01768 03 43757307 43760875 Gma13g01308 13 27595335 27599736 PCT
Gma13g01308 13 27595335 27599736 Gma19g01814 19 47395650 47403517 PCT
Gma13g01308 13 27595335 27599736 Gma03g01768 03 43757307 43760875 PCT