Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01305 ATGTCTGTGGTGCTGGCCACTTGTTTCTTCGTTCACAGGCATTGCATAAGAAGAGAAAGGCCTCGAGCTCCTCTTGTTCGTGAATTTCATGGTATGAGTAGTCGCCTAGTGAAAGCAATGCCAAGTTTGATATTTACTGTTGTTTTGGAAGATAACTGCACATCAAGAACATGTGCTATATGCCTTGAAGACTATTGTGTTGGTGAGAAGCTCAGGATTCCGCCCTGTTGTCACATGTTAAAAAGTCGAGTGAATTTTCTCCCGGGGAACTTGAGGAAGAACTTTTTAGACTATTCCTCAAAACTCGATTTCAACCAAGGTGTGCTATAG 330 0.4242 MSVVLATCFFVHRHCIRRERPRAPLVREFHGMSSRLVKAMPSLIFTVVLEDNCTSRTCAICLEDYCVGEKLRIPPCCHMLKSRVNFLPGNLRKNFLDYSSKLDFNQGVL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01305 109 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 84 IPR013083 -
Gma13g01305 109 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 79 - -
Gma13g01305 109 PANTHER RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 2-RELATED 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01305 Gma-Chr13 27526627 27527100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01305 4 78 C3H Transcription Factor Family AT1G22670 50.649 7.03e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01305 K15692 - gmx:100791248 154.451