Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01299 ATGATGGAAATGCCTGCCAGAAGATCCAACTACTCGCTCCTCAGCCAAATTCCCGACGACCAGTTCTCCGCCTCCGCCGCCCCCTCCTCCTCCGGCGACGGCAAGTCCGCCCGCGCCGGTAAGTCCGACCGCGCCGCCTTCGACTGGGACCTCGTCGCCGATCACCGGGCCGCCAACCGGATCGGAAACCTCTACTCCTCGATCGGCCTGCAGCGCCAGTCCAGCGGGAGCAGCTACGGCGAGAGCTCGCTCTCCGGCGGCGGCGACTTTTATGCTCCGACGCTCTCCACGGCGGCGGTCAGCGACGTCGACGCCTTCGGATACCTCCACGACGAGCGGAGCAAGTTCTCGGAGGTGGCGCCGGCGAGGATCGCCGGCTCCTCCTCCGGGAAGAGCTGGGCGCAGCAGACGGAGGAGAGCTACCAGCTGCAGCTTGCGCTCGCACTGCGCCTCTCGTTGCACGCCACGTGCGCCGATGATCCCAATTTCCTCGATCCGGTGCCGGACGACGCCGCGCCGCGGCTCTCGTCGTCGGCCGAGGCGGTTTCGCATAGGTTTTGGGTGAATGGCTGCCTATCATACTCTGACAAAATTCCAGATGGCTTTTACCTGATTCATGGGATGAATTCCTTTGTCTGGACCTTGTGCACTGATCTGCATGAAAATGGCCGAATTCCATCAGTTGATATGCTGAAGTCTGTGAATCCCTGCGTCGTTTCTTCACTTGAAGTAGTTATGGTGGATCGACGCAGTGACCCCAGCTTAAGAGATCTGCAAAATAATGTTCATAACATTTCTTGTACTAGCATAACAACAACAGATGTTGTAGATAAACTTTCCAAGCTGGTTTGCAACCGTATGGGTGGTTCAGCTTCTGTTGGGGAAGATCACTTTTTTTCCATCTGGAGGGATTGCAGTAATGATCTGAAAGATTGCTTAGGATCTGTTGTTATTCCCATAGGTAGTCTATCTGTTGGCCTCTGCCGGCATCGTGCTATATTATTCAAAGTACTAGCTGACGCCATTGATTTACCATGTCGAATTGCTAAGGGCTGTAAATATTGCAAAAGGGATGATGCTACATCTTGTCTTGTTCGATTTGGGCTTGAGAGGGAGTATCTTGTTGATTTAATTGGAAAGCCAGGAAACTTATCTGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTCCACGACTTAAACCGGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTCTCGGATTGTGTGTCTCTTGAGCTTGTCTTCGACAACAACTCTGCAGAACAGTTTGATGGGAAGTGCAAAGACAGCAGTAACCCTAGGCCAATTTCGTCTGATAGCAATAGAAGTTCTCACCTTCCTCTGCATCCGCAAGATTCTCATCCAAGCTCACGTGAACAAGGTTCTGAAACATATCAATCATGTAACGCTCCTCAGAACATTGTAGACTCAACTCTGGGAAAGTATCCACCACCAATAAAGCATAAGCGTCCTGCTGGTATACCAACCCCATTAGCACTTACAAATACTAATGATGACATGATTGAGGGCAAGAGGTTTGTTGAAGGAAGTCAACTGATTCCTAGCAAACATGCTCGAGAGCTTAACTTTGACATGGAGGATTTGGACATACCATGGAGTGATCTTGTCCTAAGAGAGAAAATAGGGTCAGGTTCTTTTGGAACTGTACATCGTGCTGAGTGGAATGGCTCGGATGTTGCTGTGAAAATTTTGATGGAACAGGATTTTCATGCTGAGCGCTTCAAGGAATTCCTAAGGGAGGTTGCAATAATGAAACGTTTACGGCATCCAAACATTGTTTTGTTTATGGGGGCAGTCACTCAGCCTCCTAACTTATCAATTGTCACGGAATATTTATCTAGGGGTAGCTTATATAGGCTTTTGCATAGATCTGGCGCCAAAGAAGTATTGGATGAGAGGCGTAGGCTTGGTATGGCTTATGACGTGGCAAAGGGGATGAATTATCTTCATAAACGTAATCCCCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTTGTTGACAAGAAATATACAGTGAAGGTTTGTGATTTTGGGCTTTCACGTCTGAAGGCCAATACGTTTCTCTCATCCAAGTCAGCTGCTGGGACTCCTGAGTGGATGGCTCCAGAGGTTCTTTGTGATGAGCCATCGAATGAGAAGTCCGATGTTTACAGCTTTGGTGTAATCTTATGGGAGCTTGCAACATTGCAACAGCCATGGGTTAATTTAAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGAGAAAAAGGCTTGAGATCCCACATGATGTGAATCCCCAAGTAGCTGCGCTAATTGAGGCTTGCTGGGCCTATGAGCCTTGGAAACGTCCTTCTTTTGCGAGTATTATGGATTCTTTGAGGCCATTGCTCAAACCCCCTACACCTCAACCTGGTCGTCCAAGCATGCCATTACTGACCTGA 2511 0.4898 MMEMPARRSNYSLLSQIPDDQFSASAAPSSSGDGKSARAGKSDRAAFDWDLVADHRAANRIGNLYSSIGLQRQSSGSSYGESSLSGGGDFYAPTLSTAAVSDVDAFGYLHDERSKFSEVAPARIAGSSSGKSWAQQTEESYQLQLALALRLSLHATCADDPNFLDPVPDDAAPRLSSSAEAVSHRFWVNGCLSYSDKIPDGFYLIHGMNSFVWTLCTDLHENGRIPSVDMLKSVNPCVVSSLEVVMVDRRSDPSLRDLQNNVHNISCTSITTTDVVDKLSKLVCNRMGGSASVGEDHFFSIWRDCSNDLKDCLGSVVIPIGSLSVGLCRHRAILFKVLADAIDLPCRIAKGCKYCKRDDATSCLVRFGLEREYLVDLIGKPGNLSEPDSLLNGPSSISFSSPLRFPRLKPAEPTIDFRSLAKQYFSDCVSLELVFDNNSAEQFDGKCKDSSNPRPISSDSNRSSHLPLHPQDSHPSSREQGSETYQSCNAPQNIVDSTLGKYPPPIKHKRPAGIPTPLALTNTNDDMIEGKRFVEGSQLIPSKHARELNFDMEDLDIPWSDLVLREKIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERFKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRSGAKEVLDERRRLGMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLCDEPSNEKSDVYSFGVILWELATLQQPWVNLNPAQVVAAVGFKRKRLEIPHDVNPQVAALIEACWAYEPWKRPSFASIMDSLRPLLKPPTPQPGRPSMPLLT 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01299 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
Gma13g01299 836 PRINTS Tyrosine kinase catalytic domain signature 636 649 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 PRINTS Tyrosine kinase catalytic domain signature 677 695 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 PRINTS Tyrosine kinase catalytic domain signature 724 734 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 PRINTS Tyrosine kinase catalytic domain signature 743 765 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 PRINTS Tyrosine kinase catalytic domain signature 787 809 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 MobiDBLite consensus disorder prediction 442 486 - -
Gma13g01299 836 CDD STKc_MAP3K-like 568 816 - -
Gma13g01299 836 ProSitePatterns Protein kinases ATP-binding region signature. 568 589 IPR017441 GO:0005524
Gma13g01299 836 MobiDBLite consensus disorder prediction 451 486 - -
Gma13g01299 836 MobiDBLite consensus disorder prediction 498 521 - -
Gma13g01299 836 Gene3D Phosphorylase Kinase; domain 1 555 640 - -
Gma13g01299 836 SMART serkin_6 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01299 836 SUPERFAMILY Protein kinase-like (PK-like) 540 815 IPR011009 -
Gma13g01299 836 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 121 826 - -
Gma13g01299 836 Gene3D Transferase(Phosphotransferase) domain 1 641 825 - -
Gma13g01299 836 Pfam Protein tyrosine and serine/threonine kinase 563 816 IPR001245 GO:0004672|GO:0006468
Gma13g01299 836 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 121 826 - -
Gma13g01299 836 ProSiteProfiles Protein kinase domain profile. 562 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01299 836 Pfam Ethylene-responsive protein kinase Le-CTR1 179 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01299 Gma-Chr13 27464316 27473935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01299 2 829 MAP Kinase Kinase Kinase AT5G03730 64.849 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gma13g01299 PK_Tyr_Ser-Thr 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01299 K14510 - gmx:100800648 1671.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01299 13 27464316 27473935 Gma13g01299 13 27464316 27473935 ECH
Gma10g00608 10 6472779 6482131 Gma13g01299 13 27464316 27473935 GST
Gma03g01759 03 43662426 43675140 Gma13g01299 13 27464316 27473935 PCT
Gma13g01299 13 27464316 27473935 Gma03g01759 03 43662426 43675140 PCT