Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01294 ATGGAACCAACAACAACATTGAACAACATCATCAACAACAACAACACTGTTCCTGCAGGGTCACCACCACCACCACCACCACCCTCAGTGCCTCAGCCAATGAACATGAATGTCAACATGAACATGAACGTGGGAAACACAGAAGGAACAACACCAGCAGTTCCAACACCAACACCCGCGCCAACACCAGCACCAACAACAATGGTTCCTGCAGTGCCAGCTCCAACCACAACAACACCGGGGAGTTTGGATTTGTTTGGGAAGAAGAAGAGAGGGAGGCCCAGAAAGTATGATGCAGATGGGAACCTGAGAGTGAGTGCAACACCACCACCACCACCGGGTTTCACTTTGTCCACACCTTCTTCTGAGTTCTCCTCTTCCAAAAGAGGGCGTGGTAAACACAACACAACTTTTGGCAACAACAACTACCAACAACTCTATTCTTCTTTTGGTGAGGTGTTTGCAAACACAGCTGGTGGTGATTTTGTACCGCATGTGGTGACTGTTTATACTGGAGAGGATGTTGCTGGAAAGATCGTGTCATTTGCCCAGAAGGGTCCAAGAGGAATATGCATTCTCTCTGCCAATGGAGCTATCTCGAATGTCACCATACGCCAACCTGGTTCTTCTGGTGGCATATTGACTTATGAGGGTCGGTTTGAGATTTTATCTTTGTCTGGATCATTCACAGTTGCTGACAACAGTGGCATGAAAAGCCGAACTGGTGGATTGAGTGTCTCACTTGCTGGTCCTGATGGTCGGGTGATAGGTGGTGGTGTTGCTGGACTTTTAACTGCTGCTGGCCCCATCCAGATTGTTGTAGGAAGCTTCATGCAAAATGGTTACAAGGCCCAAAAGAGGAAGTACCAACGTGAACAACAGATAGTGGCCACCCCTACTTCAGCTGGTCCAGAAATAGTGACAGCAACCAAAACCAGAGAGAATCTGTCAGTGTTTCAAGTGACAAACAGAACCTAG 978 0.4785 MEPTTTLNNIINNNNTVPAGSPPPPPPPSVPQPMNMNVNMNMNVGNTEGTTPAVPTPTPAPTPAPTTMVPAVPAPTTTTPGSLDLFGKKKRGRPRKYDADGNLRVSATPPPPPGFTLSTPSSEFSSSKRGRGKHNTTFGNNNYQQLYSSFGEVFANTAGGDFVPHVVTVYTGEDVAGKIVSFAQKGPRGICILSANGAISNVTIRQPGSSGGILTYEGRFEILSLSGSFTVADNSGMKSRTGGLSVSLAGPDGRVIGGGVAGLLTAAGPIQIVVGSFMQNGYKAQKRKYQREQQIVATPTSAGPEIVTATKTRENLSVFQVTNRT 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01294 325 MobiDBLite consensus disorder prediction 18 33 - -
Gma13g01294 325 SUPERFAMILY AF0104/ALDC/Ptd012-like 162 284 - -
Gma13g01294 325 PANTHER AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN 8 312 - -
Gma13g01294 325 CDD DUF296 164 277 IPR005175 -
Gma13g01294 325 ProSiteProfiles PPC domain profile profile. 159 302 IPR005175 -
Gma13g01294 325 Pfam Plants and Prokaryotes Conserved (PCC) domain 164 278 IPR005175 -
Gma13g01294 325 Gene3D - 164 297 - -
Gma13g01294 325 MobiDBLite consensus disorder prediction 71 139 - -
Gma13g01294 325 MobiDBLite consensus disorder prediction 118 139 - -
Gma13g01294 325 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 312 IPR039605 GO:0003680
Gma13g01294 325 MobiDBLite consensus disorder prediction 1 17 - -
Gma13g01294 325 MobiDBLite consensus disorder prediction 1 34 - -
Gma13g01294 325 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01294 Gma-Chr13 27345603 27349480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01294 88 325 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 52.610 1.19e-73 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01294 - - gmx:100779227 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01294 13 27345603 27349480 Gma13g01294 13 27345603 27349480 ECH
Gma10g00602 10 6356141 6360757 Gma13g01294 13 27345603 27349480 GST