Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01290 ATGGCTTGCATGTGGCTCAAGAATGCCCGTGGTGGCAGTGGGAAGAAGCCGCCGACGGACGTCCCACGTGGCCACTTGGCGGTGATCGTGGGAGAAGCAAAGAGAAGGTTTGTGATAAGGGCTGATTACCTTAACCATCCACTGCTTCAACAACTACTAGACCAATTATATGAAGGTTATGGCTTCAACAAGAGTGGTCCTCTGGCTATACCTTGTGATGAGTTCCTTTTTGAAGATATTATTCAGACCCTGAGAGATGGAACATCCTCTAGCCATGTGCCTCTCAAGAAGCTAGACTTCGGCTTTTCCAAGGACTCTATGCCCTTACTTCAGGGCCTTGAAAGCAAAAGGAGGAGCAGCAACTAA 366 0.4863 MACMWLKNARGGSGKKPPTDVPRGHLAVIVGEAKRRFVIRADYLNHPLLQQLLDQLYEGYGFNKSGPLAIPCDEFLFEDIIQTLRDGTSSSHVPLKKLDFGFSKDSMPLLQGLESKRRSSN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01290 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 112 IPR003676 GO:0009733
Gma13g01290 121 Pfam Auxin responsive protein 15 84 IPR003676 GO:0009733
Gma13g01290 121 PANTHER AUXIN RESPONSIVE SAUR PROTEIN 1 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01290 Gma-Chr13 27305815 27306180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01290 1 116 Calmodulin-binding Proteins AT4G34750 44.853 7.02e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01290 K14488 - gmx:100777611 249.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01290 13 27305815 27306180 Gma13g01290 13 27305815 27306180 ECH