Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01289 ATGATGAAGCATTACCATGTCTTGTACATGTTTTTATTTTTCTTACCAATTTCTACGTTAAGTCTCCACCACAATGACACTCATGCACTCACCCTTTTCCGTCGCCAAAGTGACCTACATGGCTACCTTCTTTCAAATTGGACAGGCCATGATGCTTGCAACTCCGCCTGGCGCGGCGTTCTTTGCTCCCCGAACGGCCGCGTCACCGCCCTCTCCCTCCCTTCCCTCAACCTGCGTGGCCCACTAGACCCTCTCACTCCCCTCACCCACCTTCGCCTCCTCAACCTCCACGACAACCGCTTAAACGGCACCGTTTCAACCCTCTTCTCCAACTGCACCAACCTCCAACTCCTCTACCTCAGCAGCAACGACTTCTCCGGCGAGATCCCGCCGGAGATATCCTCCCTAAAATCCCTCCTCCGCCTCGACCTCTCCGACAACAACCTTCGCGGCAAGGTTGATGTCATATCCAACTTAACACAACTCATAACACTGAGACTCCAGAACAACCTTCTCTCCGGCGAGATCCCCGACCTCTCTTCCTCCATGAAAAATCTCAAAGAACTCAACATGACAAACAATGAGTTCTACGGTCGCTTACCATCCCCCATGTTGAAGAAATTCAGTTCTACAACCTTCTCCGGTAACGAAGGATTGTGTGGTGCATCATTGTTTCCGGGTTGCTCCTTCACCACAacccctcctaacaataatgatagcaacaacaataatgataataatagtaatgagaaGGAACCGTCTCAGACAGTTTCTTCAAATCCTAGCTCCTTCCCTGAGACCAGCATAATCGCCCGTCCAGGGAGGGAGCAGCAGCGCAAGGGCTTGAGTCCTGGTGCCATTGTGGCCATCGTGATCGCGAATTGCGTGGCACTGCTCGTGGTAGTGTCGTTCGCGGTGGCGCATTGTTGTGCTAGAGGGAGGGGTTCGAGTTTGGTGGGGAGTGGGGAGAGCTACGGGAAGAGGAAGAGTGAGAGCAGCTACAATGGGAGTGATGAGAAGAAGGTGTATGGTGGTGGTGAGAGTGATGGAACCAGTGGGACTGATAGGAGTAGGCTTGTATTTTTTGATCGGAGGAGTGAGTTTGAGTTGGAGGATTTGCTTCGAGCTTCGGCGGAGATGTTAGGGAAGGGTAGTTTAGGGACGGTTTATAGGGCGGTGCTTGATGATGGGTGCACGGTGGCGGTGAAGAGGCTCAAGGATGCGAACCCTTGCGCGAGGCATGAGTTTGAGCAGTACATGGATGTGATTGGGAAGCTTAAGCATCCTAATGTTGTGAGACTCAAAGCTTATTACTATGCCAAGGAGGAAAAGCTTCTTGTCTATGATTATCTCTCCAATGGAAGCTTGCATGCTCTTCTTCACGGGAACCGTGGCCCGGGAAGAATTCCATTGGATTGGACTACAAGAATAAGCTTGGTGTTAGGAGCAGCAAGAGGTCTTGCAAAGATTCATGCAGAGTACAGTGCAGCCAAAGTGCCTCACGGGAATGTGAAATCCTCCAACGTGCTTCTAGACAAGAACGGTGTTGCATGCATCTCCGATTTTGGGTTATCACTCCTATTAAACCCGGTTCACGCCATTGCCCGATTGGGAGGGTACAGGGCCCCGGAGCAAGAACAGAACAAGAGGCTATCTCAGCAGGCTGATGTGTATAGTTTCGGAGTATTGTTGTTAGAAGTTCTCACAGGAAGAGCTCCTTCATCGCAGTACCCTTCACCGGCTCGTCCCCGAATGGAGGTAGAGCCGGAACAGGCTGCGGTGGACCTTCCCAAATGGGTTCGCTCGGTGGTGAGAGAAGAGTGGACTGCAGAGGTTTTTGATCAGGAGTTGTTGCGCTACAAGAACATTGAGGAAGAGCTTGTGTCCATGTTGCATGTGGGGTTGACTTGTGTGGTGGCGCAGCCAGAGAAGAGGCCAACCATGGAGGAAGTTGTGAAGATGATTGAGGAGATCAGGGTGGAGCAATCGCCTCTTGGGGAGGACTATGATGTATCATGCAATTCGCTTTCGCCTTCCATTCCCACCACTGAAGATGGTCTAGCTTAG 2067 0.5027 MMKHYHVLYMFLFFLPISTLSLHHNDTHALTLFRRQSDLHGYLLSNWTGHDACNSAWRGVLCSPNGRVTALSLPSLNLRGPLDPLTPLTHLRLLNLHDNRLNGTVSTLFSNCTNLQLLYLSSNDFSGEIPPEISSLKSLLRLDLSDNNLRGKVDVISNLTQLITLRLQNNLLSGEIPDLSSSMKNLKELNMTNNEFYGRLPSPMLKKFSSTTFSGNEGLCGASLFPGCSFTTTPPNNNDSNNNNDNNSNEKEPSQTVSSNPSSFPETSIIARPGREQQRKGLSPGAIVAIVIANCVALLVVVSFAVAHCCARGRGSSLVGSGESYGKRKSESSYNGSDEKKVYGGGESDGTSGTDRSRLVFFDRRSEFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCARHEFEQYMDVIGKLKHPNVVRLKAYYYAKEEKLLVYDYLSNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLAKIHAEYSAAKVPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYRAPEQEQNKRLSQQADVYSFGVLLLEVLTGRAPSSQYPSPARPRMEVEPEQAAVDLPKWVRSVVREEWTAEVFDQELLRYKNIEEELVSMLHVGLTCVVAQPEKRPTMEEVVKMIEEIRVEQSPLGEDYDVSCNSLSPSIPTTEDGLA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01289 688 Gene3D Transferase(Phosphotransferase) domain 1 451 672 - -
Gma13g01289 688 Pfam Leucine rich repeat 90 149 IPR001611 GO:0005515
Gma13g01289 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 673 - -
Gma13g01289 688 SUPERFAMILY L domain-like 23 222 - -
Gma13g01289 688 Gene3D Ribonuclease Inhibitor 18 86 IPR032675 -
Gma13g01289 688 Gene3D Ribonuclease Inhibitor 87 234 IPR032675 -
Gma13g01289 688 Gene3D Phosphorylase Kinase; domain 1 350 450 - -
Gma13g01289 688 PANTHER LRR RECEPTOR-LIKE KINASE 7 673 - -
Gma13g01289 688 MobiDBLite consensus disorder prediction 231 278 - -
Gma13g01289 688 ProSiteProfiles Protein kinase domain profile. 375 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01289 688 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Gma13g01289 688 MobiDBLite consensus disorder prediction 669 688 - -
Gma13g01289 688 Pfam Protein kinase domain 379 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01289 688 MobiDBLite consensus disorder prediction 231 267 - -
Gma13g01289 688 MobiDBLite consensus disorder prediction 316 353 - -
Gma13g01289 688 SUPERFAMILY Protein kinase-like (PK-like) 379 656 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01289 Gma-Chr13 27282729 27285735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01289 19 684 Receptor kinase-like Gene Family AT2G36570 65.339 0.0 853
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gma13g01289 Pkinase 1.9e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01289 - - gmx:102660494 1287.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01289 13 27282729 27285735 Gma13g01289 13 27282729 27285735 ECH
Gma10g00599 10 6305397 6308326 Gma13g01289 13 27282729 27285735 GST
Gma19g01797 19 47196875 47198995 Gma13g01289 13 27282729 27285735 PCT
Gma03g01745 03 43536658 43538969 Gma13g01289 13 27282729 27285735 PCT
Gma13g01289 13 27282729 27285735 Gma19g01797 19 47196875 47198995 PCT
Gma13g01289 13 27282729 27285735 Gma03g01745 03 43536658 43538969 PCT