Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01286 atgttctctgggttggtaggagtggaaaaccctttacaacaacagcagcaacaacaacaacaacaacaacaacaacaacaacaaaaccttcaccatttgcaacaccaccaCCCCCAAATGGTTCCCTATGCCACACACCATGACACTGAAAACCCTCATCATCCACACCTTCACCAATCAATCAAACAAGGGTACCCTCCCTTTTCATCCCAGACCAAACAACAACAATCTCCTCTCAGTGATGATGATGAGCCAGGGTTCCCTGCTGATGAGGACCCCAAGAGAAAGGTCTCGCCATGGCAGAGAATGAAGTGGACTGACACCATGGTGAGGCTCTTGATAATGGCGGTTTATTACATTGGTGATGAGGCTGGCTCTGAAGGGACTGATAAGAAGAAGTCATCTGGTTTGATGCAGAAGAAAGGGAAGTGGAAATCGGTTTCAAGGGCTATGATGGAGAAGGGGTTCTATGTTTCTCCTCAGCAGTGTGAGGACAAGTTCAATGACTTGAACAAGAGGTACAAGAGGGTGAATGACATTCTTGGCAAAGGAACTTCCTGCAGGGTTGTGGAGAATCAGAGTTTGTTGGATTCAATGGACTTGTCTCCAAAGATGAAAGAGGAGGTTAAGAAGTTGCTCAATTCCAAGCACTTGTTCTTCAGGGAAATGTGTGCTTACCATAACAGTTGTGGACATGGGAATAACAATGCTCCACAGCAAGGAGAGTCTGGGGGTGAAGTGTCTCAGCCTCAGGCTCAACCTCATCATCATCAGCAGCAGCAACAACAACCGCAACAACGATGTTTTCATTCATCAGAGGTTGGGAATTTGGGGGGCTCAGGTGTTGAGGGTTTGAGGATGTTGAAAGTGGGAAATGGGGAagagggtgatgatgactccgaggatgatgatgactcagaggatgatTCGGACGAGGACGAAGATGATTCGGGAGAAGGTGGTTCAAGGGGTCATGTGGGGCATGGACATGAAGATATTGAGGATGAGAATGATGGAAGGTCAATGAGAAAGAGGGCAAGGAAAGTAGGAGGGGTTTCTATGTCACCACAGTTGATGCAACAACTGAGTGCTGAGGTGAGTGGTGTGTTCCAAGATGTAGGTAAGAGTGCTTGGGACAAGAAGCAATGGATGAGGAGCAGGATAATGCAGTTGGAGGAGCAGCAAATAAGCTACCATACTCAAGCTTTTGAGTTGGAGAAACAAAGATTAAAATGGGCAAGGTTTAGCAGCAAGAAGGAGAGGGAAATGGAGACAGCCAAACTTGAAAATGAACGCAGGAGGCTTGAGAATGAGAGAATGGTTTTGCTCATTCGCCAGAAGGAATTTGAAttgatgagtcttcaacaccaacaacagcagcagcatcaacaacaacaTTCTTCCACCTAG 1410 0.4 MFSGLVGVENPLQQQQQQQQQQQQQQQQNLHHLQHHHPQMVPYATHHDTENPHHPHLHQSIKQGYPPFSSQTKQQQSPLSDDDEPGFPADEDPKRKVSPWQRMKWTDTMVRLLIMAVYYIGDEAGSEGTDKKKSSGLMQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTSCRVVENQSLLDSMDLSPKMKEEVKKLLNSKHLFFREMCAYHNSCGHGNNNAPQQGESGGEVSQPQAQPHHHQQQQQQPQQRCFHSSEVGNLGGSGVEGLRMLKVGNGEEGDDDSEDDDDSEDDSDEDEDDSGEGGSRGHVGHGHEDIEDENDGRSMRKRARKVGGVSMSPQLMQQLSAEVSGVFQDVGKSAWDKKQWMRSRIMQLEEQQISYHTQAFELEKQRLKWARFSSKKEREMETAKLENERRRLENERMVLLIRQKEFELMSLQHQQQQQHQQQHSST 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01286 469 MobiDBLite consensus disorder prediction 295 317 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 8 34 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 1 99 - -
Gma13g01286 469 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 3 468 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 234 273 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 63 81 - -
Gma13g01286 469 Coils Coil 418 445 - -
Gma13g01286 469 PANTHER F16F4.11 PROTEIN-RELATED 3 468 - -
Gma13g01286 469 Gene3D - 105 176 - -
Gma13g01286 469 Pfam Myb/SANT-like DNA-binding domain 102 225 IPR044822 -
Gma13g01286 469 MobiDBLite consensus disorder prediction 318 345 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 41 57 - -
Gma13g01286 469 MobiDBLite consensus disorder prediction 234 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01286 Gma-Chr13 27260612 27262434 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma13g01286 Myb_DNA-bind_4 5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01286 - - gmx:100816661 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01286 13 27260612 27262434 Gma13g01286 13 27260612 27262434 ECH
Gma10g00596 10 6284317 6285882 Gma13g01286 13 27260612 27262434 GST
Gma19g01795 19 47180735 47182637 Gma13g01286 13 27260612 27262434 PCT
Gma03g01743 03 43521915 43523282 Gma13g01286 13 27260612 27262434 PCT
Gma13g01286 13 27260612 27262434 Gma19g01795 19 47180735 47182637 PCT
Gma13g01286 13 27260612 27262434 Gma03g01743 03 43521915 43523282 PCT