Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01277 ATGAAACTCTCTGTGTTCCACCATCAGCACCATCCTATGATTCTCAATTGCCCCCTTACCTTGACAAGGACACACAAAAGACTTTACAACAATGGTTCATATAGGTGGTTACCATGCCACTGCTCACATTCTTCCACAAGTAAAACTGCTGCAGAACCAGTTACAGTTTCTTTAAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTGTTGCTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCCAAAATTCCTGAAAGTGATTATACAACCTTGCCCAATGGTTTGAAGTACTATGATTTGAAGGTTGGGAATGGAGCTGAAGCTAAAATGGGATCCCGTGTTGCAATTCATTATGTCGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGCGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGCCAATCTGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGAGTACAAGGCATGCGAGTAGGAGGCCAGCGGCTGTTAATTGTTCCTCCTGAACTTGCCTATGGAAGCAAAGGAGTCCAAGAAATCCCTCCCAATTCAACAATAGAGTTGGACATTGAATTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCCGTAAAGATAGTTGAAGGACTAATTTTTGCTCGGAGTAAACAAGATTATCAGATGTGA 738 0.4336 MKLSVFHHQHHPMILNCPLTLTRTHKRLYNNGSYRWLPCHCSHSSTSKTAAEPVTVSLSIEGRRALLSCLLTTVAGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKMGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVQGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEGLIFARSKQDYQM 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01277 245 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 122 217 IPR001179 GO:0003755
Gma13g01277 245 SUPERFAMILY FKBP-like 97 220 - -
Gma13g01277 245 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 10 233 - -
Gma13g01277 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP16-4, CHLOROPLASTIC 10 233 - -
Gma13g01277 245 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 126 220 IPR001179 GO:0003755
Gma13g01277 245 Gene3D - 86 225 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01277 Gma-Chr13 27131427 27136117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01277 115 219 Calmodulin-binding Proteins AT5G48570 32.727 4.42e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01277 - - gmx:100815603 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01277 13 27131427 27136117 Gma13g01277 13 27131427 27136117 ECH
Gma10g00583 10 6116317 6120560 Gma13g01277 13 27131427 27136117 GST