Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01264 ATGGAATCCTCCGCCACCACCGTTTCCCCCGATTCCGAAAACGACACCACCAACACGCGAGTGAACGGCTACGTCGTTTACACTCGCCGCAAGCGGACCCTCACCCTCCATTCCAGTAATGACGCCGCCAAGTGGCTCAGAACAGCTGATATCAAAGTCGAAGCTCGCCACGGCGGCGGCGGCGGCGGCGACGACGACGTCGTTTTCAAGCGCCGCCCCAAGCTCGAGTCTGAATTAACGGAGGTGGAATTGAAAACGGCGACGTCGTTGAAGACGACGAAGAAGATCATTGTCGTCCACAAGAAGCCCGTCACCGTCAAGGAGCTATTCCAAACGGGCTTGCTCGATGGGGTTCCGGTCGTTTACGTCGGTTGCAAAAAGGATTCAACTACGGAATTGCGAGGTGAAATTAAAGATGGGGGGATCTTGTGCTCATGCCGTCTGTGCAATGGACGCAGGGTTATTCCACCTTCCCAATTCGAAATTCATGCGTGCAACATATATAAGAGGGCAGCACAATATATTTGCCTTGAAAATGGGAAGAGCCTGCTTGACCTAATGAGAGCATGCAGGGCAGCTCCGCTACATACATTGGAGGCGACCATTCAAAATTTTATTAATTCTCCGCCCGAGGAGAAATATTTTACTTGCAAAAGTTGCAGAGGGTGTTTCCCTTCTTCCAATGTGGAAAGAGTGGGGCTTTTATGTCTATCTTGCGTGGAATCAAGGAAATCTGAAAAAAGTTCTATTCATGCCGTGGGTAAAAGAATAAGGTCCCCTCGGCCAGTATTATTCTCCCATTCATGTTCATGTTGTACTACTGAATCTGAACTCTGTATCTCTCCTCAAACTAAGAAACAGTGGAAGACAAGAACAAAGTCATCCAAACTGTCGGTAAAATTGAAGACTGTACCAATTACTTCAAAGTGTTTATCTCCACAAAACAAAAGTCAGTGGAGGATCTCTAAAAGGTATCAACGATTACATAAATTAATTTTTGAAGAGGATGGATTGCCTAATGGAGCTGAAGTAGCTTATTATGCACGTGGACAGAAATTGCTTGAGGGTATCAAAACACGCTGTGGAATTGTCTGTCGATGCTGCAACACTGAGGTCAGCCCCTCACAGTTTGAGGTCCATGCAGGCTGGGCTTCTCGCAGGAAACCTTATGCATACATCTACACGTCAAATGGGGTGTCACTCCATGAGTTAGCAATATTTCTCTCAAAAGATCACAAATGCACTACAAAGCAGAATGACTATGTATGTGTTGTTTGTTGGGATGGTGGAAACCTGTTGCTTTGTGATGGATGTCCAAGGGCATTTCATAAAGAATGTGCATCTGTATCAAGTATTCCTCGGGGTGAGTGGTACTGTCAAATTTGTCAACACACATTCCTCAGAGAAAGGCCTGTGTTATACAATGCCGATGCTGTGGCAGCTGGAAGGGTAGAAGGTGTTGATCCTATTGAGCAGATCGCCAAGAGATGCATTCGCATAGTAAAAGACATAGGAGCTGAGATGGGTGGATGTGTTTTATGCAGGAGTTCTGACTTCAGCAGATCAGGATTTGGTCCTCGTACAATTATAATTTGTGATCAGTGCGAAAAGGAATATCATGTTGGCTGCTTGAGGGATCATAAGAAGGCATATTTGAAGGAGTTGCCGGAAGGGGATTGGTTTTGTTGCAATGATTGCACAATAATACATTCTACTTTGGAGAATCTCTTGATTAGGGTGGCTGAGAGACTCCCTGAAGCTCTTTTGGATGTTATAAAGAAGAAGCAAGTGGAAAGATGTTTAGAACCCCTTAATGAGATTGATGTACGATGGAAACTTCTTAATGGAAAAATTGCATCTCCTGAAACTAGGCCATTGCTTTTGGAGGCAGTGTCCATGTTTCATGAATGCTTTGATCCTATAGTTGATCCAGCTGCTGGACGTGACCTTATTCCTGCCATGGTTTATGGAAGGAATTTGCAGACTCAGGATTTTGGAGGAATGTATTGTGCATTATTGATTGTCAATTCATCTGTGGTATCCGCGGGCATGGTTCGAATTTTTGGTAGAGATATTGCTGAACTCCCTTTAGTTGCAACAAGATATAAGAACCGTGGAAAGGGCTACTTCCAAACACTTTTCGCATGCATTGAGAGGCTGCTGGCTTTTTTGAATGTGAAAAATCTTGTGCTACCAGCTGCTGAAGAAGCAGAATCAATATGGACAGAAAAATTCGGGTTTAGCAAGATGAAACTTGACCAGCTCACCAACTATAGAATGAACTGCCATCAAATCATGGCATTCAAAGGGACAAACATGCTTCATAAAACGGTGCCTCGATGTCGGGTCACCAATTCTCAAGCATGA 2367 0.4466 MESSATTVSPDSENDTTNTRVNGYVVYTRRKRTLTLHSSNDAAKWLRTADIKVEARHGGGGGGDDDVVFKRRPKLESELTEVELKTATSLKTTKKIIVVHKKPVTVKELFQTGLLDGVPVVYVGCKKDSTTELRGEIKDGGILCSCRLCNGRRVIPPSQFEIHACNIYKRAAQYICLENGKSLLDLMRACRAAPLHTLEATIQNFINSPPEEKYFTCKSCRGCFPSSNVERVGLLCLSCVESRKSEKSSIHAVGKRIRSPRPVLFSHSCSCCTTESELCISPQTKKQWKTRTKSSKLSVKLKTVPITSKCLSPQNKSQWRISKRYQRLHKLIFEEDGLPNGAEVAYYARGQKLLEGIKTRCGIVCRCCNTEVSPSQFEVHAGWASRRKPYAYIYTSNGVSLHELAIFLSKDHKCTTKQNDYVCVVCWDGGNLLLCDGCPRAFHKECASVSSIPRGEWYCQICQHTFLRERPVLYNADAVAAGRVEGVDPIEQIAKRCIRIVKDIGAEMGGCVLCRSSDFSRSGFGPRTIIICDQCEKEYHVGCLRDHKKAYLKELPEGDWFCCNDCTIIHSTLENLLIRVAERLPEALLDVIKKKQVERCLEPLNEIDVRWKLLNGKIASPETRPLLLEAVSMFHECFDPIVDPAAGRDLIPAMVYGRNLQTQDFGGMYCALLIVNSSVVSAGMVRIFGRDIAELPLVATRYKNRGKGYFQTLFACIERLLAFLNVKNLVLPAAEEAESIWTEKFGFSKMKLDQLTNYRMNCHQIMAFKGTNMLHKTVPRCRVTNSQA 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01264 788 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 485 IPR013083 -
Gma13g01264 788 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 56 784 - -
Gma13g01264 788 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 508 568 IPR013083 -
Gma13g01264 788 MobiDBLite consensus disorder prediction 1 20 - -
Gma13g01264 788 SMART PHD_3 510 567 IPR001965 -
Gma13g01264 788 SMART PHD_3 422 463 IPR001965 -
Gma13g01264 788 SUPERFAMILY FYVE/PHD zinc finger 418 466 IPR011011 -
Gma13g01264 788 ProSitePatterns Zinc finger PHD-type signature. 423 462 IPR019786 -
Gma13g01264 788 SUPERFAMILY FYVE/PHD zinc finger 504 567 IPR011011 -
Gma13g01264 788 Pfam Tify domain binding domain 135 190 IPR032308 -
Gma13g01264 788 Pfam Tify domain binding domain 357 406 IPR032308 -
Gma13g01264 788 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 666 751 IPR016181 -
Gma13g01264 788 ProSiteProfiles Zinc finger PHD-type profile. 420 465 IPR019787 -
Gma13g01264 788 PANTHER AUTOIMMUNE REGULATOR 56 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01264 Gma-Chr13 26966529 26978174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01264 89 778 PHD Transcription Factor Family AT2G36720 50.894 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01264 - - gmx:100816654 1568.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00573 10 5986187 5997535 Gma13g01264 13 26966529 26978174 GST
Gma19g01776 19 47013141 47021938 Gma13g01264 13 26966529 26978174 PCT
Gma13g01264 13 26966529 26978174 Gma19g01776 19 47013141 47021938 PCT