Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01248 ATGCTATCATTGCCTTTCATACACCATGTTATCACAGGTCGTTGGTTCATGATCTTCGCATCATGTCTCATCATGGCTGTTTCTGGAGCAACCTACATGTTTGGTTTGTACTCAAACGAGGTCAAAACCTCTCTGGGGTATGACCAGTCAACGCTCAACTTGATAAGCTTCTTCAAGGACCTTGGTGCCAACCTTGGAATTTTCTCAGGCTTGATCAATGAGATAAGCCCTCCATGGGTGATACTAGCCATGGGAGCCACCATGAACTTCATTGGCTACTTCATGATATGGCTCTCTGTCACTTCACGCATTGCCAAACCCCAAGTGTGGCAAATGTGTCTGTATTTTTACATTGGTGCCAATTCTCAGTCTTTTGCCAACACTGGTGCTTTGGTTAACTGTGTCAAGAGCTTCCCAAGAAGTCGTGGAAGTGTCATTGGTCTTCTTAAGGGTTATGTGGGTCTAAGTGGTGCTATTTTCACTCAGTTTTACCATGCCTTCTATGGTGATGACTCTAAGGCTCTTATTTTCCTCATTGGGTGGCTTCCTGCTGCTATTTCCTTCGTTTTCCTTCCAACGGTTAGGGTGTTGAGTATAACCCCACAACCCAAAGAGATCAAGGTTTTCTACCAGCTTCTTTATATCTCACTTGGGGTTGCAGGGTTTCTCATGGTGTTGATTATTATACAAAACAAGTTGAGTTTCACAAGGGTGGAGTACATAGGGGATGGCATGGTGGTTCTTTTATTACTTCTTCTCCCACTTGGTGTTGTGTTTAGTGAAGAATTCAAACTTTGGAAGAACCAAAACCAAAACCAAACATTCACTAATCATGCAGGTGCTGCTTCAGTTGTTGAATTGCCACAGCCAGAAGAAGCACATGCAGTAGCACCAACTCATTCAGAAAGGAAAAACAACAACTCGTGCTTGAAGAACGTTTTCAAGCCTCCAAAAAGGGGTGAGGACTACACCATCTTCCAAGCCCTCTTCAGCATTGACATGCTGATTCTGTTCATTGCAACAGTTTTTGGTGTTGGTGGAACATTGACAGCACTTGACAATTTAGGACAGATTGGGAACTCATTGGGGTACCCCAGAAAGAGCCTCACAACTTTTGTGTCCCTTGTGAGCATATGGAACTATTTGGGACGAGCATCTTCTGGCTTTGCCTCTGAGTACTTATTGACCAAATACAAGTTCCCTCGTCCCTTGTTGCTCACTCTAGTCATGCTTCTCTCTTGTGTTGGCCACATTCTTATTGCTTTTGGTATCCCAAACTCTCTTTACTTCTCCTCAGTGATTATTGGGTTTTGCTTTGGGGCCATATGGCCCTTAATGTTTGCCATCATATCTGAAATATTTGGCCTCAAATACTACTCCACTTTGTACAATTTTGGGGCAGTGGCAAGCCCTGTTGGCTCTTACATTCTCAATGTGAAAGTGACTGGTTATTTGTATGATAAAGAGGCTTTGAAGCAGTTGGGGGTGAAGGGACTCATAAGGCAAAAGGGGAAGGACCTAACTTGCGTTGGAGTGCAATGCTATAGGATGGCTTTTCTCATTATCACTGCTTCAACTTTGGTTGGATGTGTTGTTTCTTTTATTCTTGTGTTGAGGACTAGAAATTTTTACAAAGGTGACATTTATGAGAAGTTCAGAGTTCTTGAACTAGACACAGGAGAGAGTCTTCCAACTTTTGGCAGCACTAGTGGCACCACCACTACCACAAACCGCGTGGAAGAACAAGATAAAATCAATAGGAAATAA 1767 0.4307 MLSLPFIHHVITGRWFMIFASCLIMAVSGATYMFGLYSNEVKTSLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVILAMGATMNFIGYFMIWLSVTSRIAKPQVWQMCLYFYIGANSQSFANTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQFYHAFYGDDSKALIFLIGWLPAAISFVFLPTVRVLSITPQPKEIKVFYQLLYISLGVAGFLMVLIIIQNKLSFTRVEYIGDGMVVLLLLLLPLGVVFSEEFKLWKNQNQNQTFTNHAGAASVVELPQPEEAHAVAPTHSERKNNNSCLKNVFKPPKRGEDYTIFQALFSIDMLILFIATVFGVGGTLTALDNLGQIGNSLGYPRKSLTTFVSLVSIWNYLGRASSGFASEYLLTKYKFPRPLLLTLVMLLSCVGHILIAFGIPNSLYFSSVIIGFCFGAIWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVKVTGYLYDKEALKQLGVKGLIRQKGKDLTCVGVQCYRMAFLIITASTLVGCVVSFILVLRTRNFYKGDIYEKFRVLELDTGESLPTFGSTSGTTTTTNRVEEQDKINRK 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01248 588 Gene3D MFS general substrate transporter like domains 322 543 IPR036259 -
Gma13g01248 588 CDD MFS_Mch1p_like 13 530 - -
Gma13g01248 588 SUPERFAMILY MFS general substrate transporter 13 543 IPR036259 -
Gma13g01248 588 Pfam Nodulin-like 14 258 IPR010658 -
Gma13g01248 588 PANTHER MFS TRANSPORTER 6 578 - -
Gma13g01248 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 578 - -
Gma13g01248 588 MobiDBLite consensus disorder prediction 566 588 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01248 Gma-Chr13 26791942 26793828 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01248 9 553 Nodulin-like Gene Family AT2G39210 63.834 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01248 - - gmx:100814000 1135.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma13g01248 13 26791942 26793828 Gma20g01091 20 37586431 37588425 ECH
Gma13g01248 13 26791942 26793828 Gma13g01248 13 26791942 26793828 ECH
Gma10g00534 10 5508917 5510737 Gma13g01248 13 26791942 26793828 GST
Gma19g01752 19 46826792 46828918 Gma13g01248 13 26791942 26793828 PCT
Gma03g01699 03 43170764 43172794 Gma13g01248 13 26791942 26793828 PCT
Gma13g01248 13 26791942 26793828 Gma19g01752 19 46826792 46828918 PCT
Gma13g01248 13 26791942 26793828 Gma03g01699 03 43170764 43172794 PCT