Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01238 ATGAAGTCAAGATTTCTTAGAGGGTGCCTTAACAAGTGCAAGAAAATGTGCCTAAACAAGTGCATATCTTGTGAGGACTGTTGTGAATGGGCTTTGTGGTCTTCTTCTTTGCATGAAGCTTGCTCCAACATTCCAAGTGATGTTCCAAAGGGTCACTTGGTTGTGTATGTGGGAGAAAACCACAAGAGATATGTGATCAAGGTTTCATTGCTCCACCATCCACTCTTCAGGGCCTTGTTGGATCAAGCTCAGGAAGAGTATGACTTTATTGCTGATTCAAAACTCTGCATTCCCTGTGATGAACACCTCTTCCTTAGTGTACTTCGATGTGCTAGCTCCCCACAGAACCAACGAGTGTGTCTGTGTCTTTGA 372 0.4382 MKSRFLRGCLNKCKKMCLNKCISCEDCCEWALWSSSLHEACSNIPSDVPKGHLVVYVGENHKRYVIKVSLLHHPLFRALLDQAQEEYDFIADSKLCIPCDEHLFLSVLRCASSPQNQRVCLCL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01238 123 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 2 123 IPR003676 GO:0009733
Gma13g01238 123 Pfam Auxin responsive protein 36 110 IPR003676 GO:0009733
Gma13g01238 123 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 2 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01238 Gma-Chr13 26667074 26667560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01238 33 118 Calmodulin-binding Proteins AT4G34750 46.739 1.60e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01238 K14488 - gmx:100812927 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00526 10 5374877 5375254 Gma13g01238 13 26667074 26667560 GST
Gma19g01724 19 46558836 46559213 Gma13g01238 13 26667074 26667560 PCT
Gma03g01677 03 42894985 42895350 Gma13g01238 13 26667074 26667560 PCT