Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01237 ATGGACACGAGAAAAACGCGAGGGACGAAAACACCTCACCTTCCATCCCTCCGTTTCGTGACGCTTTTTTGGCGGTTTTGGCCTTTTTCGGTTTCGAACATTCGCACGAATTTCTCTCTCACTCTCTCTGTCTTCAATTCAACACTTCGAGGGCATGAGATGGATCGGGAAGAATATTTGCGGAAGTGTTCCAATATGAAATGCCAAAGAGTTCAGGTGGATGAATCATTTGTACCTGCTCTTCAAGATGAAGTAATGGAAGTTGAGCATTTGCTTGCAGAACCTAGAAACGTTCATGCTTCCCTGGATGGTAGTTTGGATTCTCATACAACTTTGAATGACAAGGATGATTTGGAACTGGAGGTCCTTGATGGATTGCTGGATGATGTTGAAATTGATGATCTTGAAGGAACTGGTGGTTTTGCTGGTGCATGTGAAGAATATTTTTTGGATTTTGGATTTGCCGACAAATTTGAGGAGGTACTAGGCTCAGGTCCTTTTGAAGGTTCACTCTTGCAAATTTCAAGTTCTGAAAGTCATTCTTCCGGATTAAGCGGAAGTAGCATTGTTGGTGGGGTTTTAGAATCAACCAAAGTACCTATTGCAAAATCTGAATGCAAAAATGATTCTCTAGATGAGACAATAACCTATGAAGCACATGGTGCCTTCAGGAACAATCCAAGTCAACCATCAAAAGTAAATTGCAGATACAACATTTCACTTGATATACAACATCTGCAAGAGTTGGAAAACAATAGTCATTTAGCTGCTGGTATATTGACTTGTAAGAAGGGAAAAGGTCCTGTTGAAAAAGGCCAACCTGCTGTACTTAGAGAGAAGAGATTCCGAAAGCCTACCCAGAGGTACATTGAAGAATTTTCAAATTCAAGGTCAAAGGAAAAGGCACCAACTGCTGTTACAAAAACTGAACATTTAAGTGACTCATCATGTGATGTACTTCATATAAGAATTAAAGCATTGAAAAAGAGTCCAAGCGAGAAGTCTAGTAATGAAAATAGTGATGTGATGCTTCCTGAGTTGCAAGTTCGCAAAAGGCGTCTGGAGAAAGAGAAACTTGAGTATGACAAGGAGTTATTTCCCTCGGAATCCGAGGATGAATGTTCGACATCAAAAAGATCTAGAAGGAAAGATCGAAGAAAGCATCAGAAGATGTGGACTCTCCCTGAAGTGTTGAAGTTGGTTGAAGGCATATCTGAATATGGAGTTGGTCGATGGACTGACATAAAGAGGTTTCTGTTTTCTTCTTCAAGCTACCGAACTCCCATAGATCTCAGGGACAAGTGGCGGAACCTTTTGAGAGCCAGTTCTGCACAGAAAACCTCGAGAGAGGCTGAGCAAAATGACGAGCTTGCCCTGCGTCCCTTGCCATTTAATGTGGTACATCGTGTGCGAGAATTGGCTAAAATTCACCCATACCCAAGGCAACGTGGGTCAAAGAGGTTGCGTGTTAGCCAAGCTGGCTCTTCTATCATTGCTAAAGATTCTCCTCCCCTTAGTCTTAGCAAAAGAAATGTACGTAGGAAGTTTACTTAG 1554 0.4176 MDTRKTRGTKTPHLPSLRFVTLFWRFWPFSVSNIRTNFSLTLSVFNSTLRGHEMDREEYLRKCSNMKCQRVQVDESFVPALQDEVMEVEHLLAEPRNVHASLDGSLDSHTTLNDKDDLELEVLDGLLDDVEIDDLEGTGGFAGACEEYFLDFGFADKFEEVLGSGPFEGSLLQISSSESHSSGLSGSSIVGGVLESTKVPIAKSECKNDSLDETITYEAHGAFRNNPSQPSKVNCRYNISLDIQHLQELENNSHLAAGILTCKKGKGPVEKGQPAVLREKRFRKPTQRYIEEFSNSRSKEKAPTAVTKTEHLSDSSCDVLHIRIKALKKSPSEKSSNENSDVMLPELQVRKRRLEKEKLEYDKELFPSESEDECSTSKRSRRKDRRKHQKMWTLPEVLKLVEGISEYGVGRWTDIKRFLFSSSSYRTPIDLRDKWRNLLRASSAQKTSREAEQNDELALRPLPFNVVHRVRELAKIHPYPRQRGSKRLRVSQAGSSIIAKDSPPLSLSKRNVRRKFT 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01237 517 Gene3D - 377 490 - -
Gma13g01237 517 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 61 515 - -
Gma13g01237 517 ProSiteProfiles Myb-like domain profile. 384 439 IPR001005 -
Gma13g01237 517 SMART sant 388 441 IPR001005 -
Gma13g01237 517 Pfam Myb-like DNA-binding domain 391 439 IPR001005 -
Gma13g01237 517 PANTHER TRF-LIKE 8 61 515 - -
Gma13g01237 517 SUPERFAMILY Homeodomain-like 391 458 IPR009057 -
Gma13g01237 517 Coils Coil 344 364 - -
Gma13g01237 517 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 383 443 IPR017930 -
Gma13g01237 517 CDD SANT_TRF 390 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01237 Gma-Chr13 26657486 26663224 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01237 390 439 Single Myb Histone (SMH) Gene Family AT1G15720 50.000 2.57e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01237 - - gmx:100810255 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00525 10 5363836 5370267 Gma13g01237 13 26657486 26663224 GST