Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01236 ATGAGGAACTGTGCCTCATGGCTCCCTCTTCTCTTCTCGTTGATCCCTCTCTTCGCGTGGCGGATTCAGTGCGCCGATAACAATTTTGCACCCTCCTTTTACTCCGAAGAAATCTACAAGGAGCTTGAAAGCCTCGCTTCCCTGTTAAACAAGGACATTAAAGCAGGTTTAGGTTTCTGCATCAAGGATGTGAATAAAGATTGGGAGGAAGCATTTGATTTTAAAGGAAGGTTGGATTTCGTGGATTCTTGTGTTAAGAAAAAAGGAGATTTCAGAGATAGAATATGTACTGTGGCTGAAATAAGGTACTACTTCCACGGTTTCTTGGCAGAAGGGGCCTCATCTGCCAATTACGTAAAACCTAACAAGAATTGCAATTTGACCTCATGGGTTTCTGGTTGTGAACCTGGATGGAGTTGTAGTGCTGGAAAAAATGTTGACCTCAAAAAGGACATAAAGGAAATTCCTTTTAGAACCAGTAACTGTCAGCCTTGTTGTGAAGGGTTTTTTTGCCCTCAAGGATTGACTTGTATGATACCTTGCCCACTAGGTTCTTATTGTCCACTTGCAAAACTGAACAATTCGACCGGAATATGTGACCCATATAGTTACCAGATACCACAGGGAGAAACAAATCATACTTGTGGCGGTGCTGATATTTGGTCTGGTGTGGTGAACAATAGTGATATCTTTTGTTCTCCAGGGTCCTACTGCCCGACTACAACACGCAAAGTTTCTTGTGACAGTGGATATTATTGCAGGATGGGTTCTACTCACCAAAATCCATGCTCCAAGTTGAGTACCTGTAATCCAAACACAGCAACCCAAAATATGCATGCTTATGGCGCTTTGATTATTGTTGCATTGAGTACTCTCTTGATCTTCATTTATAATTGTTCTGATCAAGTTCTAGTTACTCGAGAAAGGAGAAAGGCTAAATCCAGGGAATCAGCTGCTAGACAAGTAAGAGAAACTGTACAGGCTCGAGAAAGGTGGAAAATAGCAAAAGATGTTGCTAAGAAAGGTAGAGGGGGATTGCAAGAGCAATTATCTCGCACTTTTTCTCGCAAAAAATCAGTAAAGCAATCAGATCATTCTAGCCAAGCTAAACGTGGTACGGGTGATACATTTTTGCCACCAATGCCTCCAAATTCTTCAAGCTTATATGAGCAGCCATCTGCAGCTTTAAAAGCACAAAACAAGGAACCTACCAACCTTACTAAAATGTTGAATTCCCTCGAGGATGATCCCCACAGCAATGAAGGATTCAATCTACAAATTGGAGATAAAAATATTAAAAAGCAGATGCCAAAGGGCAAGAATTTACATACACAAAGCCAGATTTTAAGGTATGCTTATGGTCAGATTGAGAAGGAGAAAGCTCAACAAGAGAAAAACAAGAACTTGACTTTCTCAGGAGTTATTTCAATGGCTACTGAAGGCGATGTTCGAACAAGGCCTGTGATTGAGGTAGCTTTTAAGGATTTAACTCTTACTTTGAAAGGTAAAAGAAAACATATAATGAGATGTGTGACTGGTAAACTAATGCCGGGTCGAGTTTCTGCTGTGATGGGTCCCTCTGGAGCCGGCAAAACTACATTTCTTTCTGCCTTGGCAGGGAAGGCAAGAGGATGCACGATGACAGGCTCAATTCTAATCAATGGAAAGCCCGAATCCATTCATTGTTATCAGAAAATTATTGGTTATGTGCCACAAGATGATATTGTGCATGGGAACTTGACAGTGGAGGAAAATCTTCGTTTCAGCGCAAGATGCAGACTGTCTGCGGATATGCCAAAACCAGATAAGGTTCTGATTGTTGAAAGAGTAATTGAGTCCTTAGGACTCCAGGCAGTGAGGGACTCCCTTGTTGGGACAGTAGAGAAGAGAGGTATATCTGGAGGGCAACGAAAGCGTGTAAATGTAGGGATGGAGATGGTTATGGAGCCTTCATTATTAATCTTAGATGAGCCTACAACTGGCCTAGACAGTGCATCTTCCACTTTACTACTTAAAGCACTTCGTCGCGAAGCACTTGAAGGTGTAAATATATGCATGGTACTTCACCAACCAAGCTATACTTTGTTCAGAATGTTTGATGATATAATCTTTCTAGCCAAAGGTGGCCTTACTGCATATCATGGTCCTGTTAAAAAGGTAGAAGAATACTTTGCTGGCATTGGAATCACTGTACCCGATCGCGTGAATCCTCCGGACCATTTCATCGACATTTTGGAAGGTTTAGTGAAACCAAATGGAAATGTGACCCATCAACAACTTCCTGTTAGATGGATGTTACATAATAGTTACCCAGTACCACCAGACATGCTTCATTTTGCTGATCAAATTGCTGCCACCTCCTCCTCCTCCTCCTCCTCAAATACAAATCATGCAATAAAGGGCACAGATGAAGTTGTTGATCAATCCTTTGCTGGAGAGTTTTGGGAGGATATGAAGAGTAATGTTCAGATGCAACGAGATCATCTAGAGGCAACCTTCTTAAAGACTAAGGACTTATCAAATCGAAGAGCTCCGGGCGTAGCTCGACAATATAGATATTACCTTGGGCGGATTTGTAAGCAGACGCTACGAGAAGGAAAATCACAAGCAGTTGACTACCTCCTTTTGTTAGTTGCTGGTGCTATATTAGGAACTCTTACTAAAGTTAATGACGAAACATTTGGTTCCCTTGGATATACCTATACTGTTATTGCTGTCTCTTTACTTTGCAAGATTGCAGCACTCAGAGCATTTTCTCTGGATAAATTACAATACTGGAGGGAGAGTGCATCTGGAATTAGTAGTCTGGCTCATTTTTTGGCCAAAGATACAATTGAACTGTTCAATATAATCATCAAACCTGTAGTTTATCTGTCCATGTTCTATTTTTTTAGCAATCCAAGGTCAAGCTTTGCAAGTAATTATGCAGTTTTGGTCTGCCTTGTGTACTGTGTAACTGGCATGGCTTATGCAATAGCAATTTATTTTGAGCCTGCTCCAGCACAACTGTGGTCAGTGCTTCTCCCGGTTGTTATGACTCTTATTGCGAACCAAACAAGAGATACTGTCTTTATGAAGGTCCTCATAAAGTTGTGCTACCCAAATTGGGCTTTGGAGGCCTTTATCATTGCAAATGCTGAAAGGTTTACTGGAGTCTGGCTGATAACTCGGTGTAGTTCACTAATGAACAGTGGCTATAATGTCAGCGACGGGCCTCTTTGTCTGGTTGTCCTCATTCTTTACGGTATAATTGCTCGAGTTGTGGCCTTCTTTTGTCTAGTGATCACTCAAAAGAAGTGA 3300 0.4145 MRNCASWLPLLFSLIPLFAWRIQCADNNFAPSFYSEEIYKELESLASLLNKDIKAGLGFCIKDVNKDWEEAFDFKGRLDFVDSCVKKKGDFRDRICTVAEIRYYFHGFLAEGASSANYVKPNKNCNLTSWVSGCEPGWSCSAGKNVDLKKDIKEIPFRTSNCQPCCEGFFCPQGLTCMIPCPLGSYCPLAKLNNSTGICDPYSYQIPQGETNHTCGGADIWSGVVNNSDIFCSPGSYCPTTTRKVSCDSGYYCRMGSTHQNPCSKLSTCNPNTATQNMHAYGALIIVALSTLLIFIYNCSDQVLVTRERRKAKSRESAARQVRETVQARERWKIAKDVAKKGRGGLQEQLSRTFSRKKSVKQSDHSSQAKRGTGDTFLPPMPPNSSSLYEQPSAALKAQNKEPTNLTKMLNSLEDDPHSNEGFNLQIGDKNIKKQMPKGKNLHTQSQILRYAYGQIEKEKAQQEKNKNLTFSGVISMATEGDVRTRPVIEVAFKDLTLTLKGKRKHIMRCVTGKLMPGRVSAVMGPSGAGKTTFLSALAGKARGCTMTGSILINGKPESIHCYQKIIGYVPQDDIVHGNLTVEENLRFSARCRLSADMPKPDKVLIVERVIESLGLQAVRDSLVGTVEKRGISGGQRKRVNVGMEMVMEPSLLILDEPTTGLDSASSTLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIIFLAKGGLTAYHGPVKKVEEYFAGIGITVPDRVNPPDHFIDILEGLVKPNGNVTHQQLPVRWMLHNSYPVPPDMLHFADQIAATSSSSSSSNTNHAIKGTDEVVDQSFAGEFWEDMKSNVQMQRDHLEATFLKTKDLSNRRAPGVARQYRYYLGRICKQTLREGKSQAVDYLLLLVAGAILGTLTKVNDETFGSLGYTYTVIAVSLLCKIAALRAFSLDKLQYWRESASGISSLAHFLAKDTIELFNIIIKPVVYLSMFYFFSNPRSSFASNYAVLVCLVYCVTGMAYAIAIYFEPAPAQLWSVLLPVVMTLIANQTRDTVFMKVLIKLCYPNWALEAFIIANAERFTGVWLITRCSSLMNSGYNVSDGPLCLVVLILYGIIARVVAFFCLVITQKK 1099
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01236 1099 Gene3D - 482 727 IPR027417 -
Gma13g01236 1099 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 491 732 IPR003439 GO:0005524
Gma13g01236 1099 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 28 1095 - -
Gma13g01236 1099 Pfam ABC-2 type transporter 689 1099 IPR043926 GO:0140359
Gma13g01236 1099 MobiDBLite consensus disorder prediction 366 389 - -
Gma13g01236 1099 Pfam ABC transporter 511 659 IPR003439 GO:0005524
Gma13g01236 1099 CDD ABCG_EPDR 489 715 - -
Gma13g01236 1099 ProSitePatterns ABC transporters family signature. 632 646 IPR017871 GO:0005524
Gma13g01236 1099 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 28 1095 - -
Gma13g01236 1099 SMART AAA_5 517 709 IPR003593 -
Gma13g01236 1099 MobiDBLite consensus disorder prediction 339 389 - -
Gma13g01236 1099 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 714 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gma13g01236 Gma-Chr13 26641107 26651996 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01236 518 711 Calmodulin-binding Proteins AT2G36910 28.218 1.52e-09 60.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01236 - - gmx:100812387 2197.93
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00524 10 5337363 5348566 Gma13g01236 13 26641107 26651996 GST