Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01230 ATGACCTCACAAGTTGTCCTACACAACAATTTCGAAACCAAACCCTCCGCCACCGTCACCACCATCGTCGAGTCCCCATCCGTCGCGCCGCCATCGCTCGCCGTCGCGAAGAGACCTTCCACCAAGGACCGCCACACCAAGGTCAACGGCCGCGGCCGCCGCGTCCGCATGCCGCCGCTCTGCGCCGCGCGCATTTTCCAGCTCACGCGCGAGCTCGGCCACCGATCCGACGGCGAGACCATCGAGTGGCTCCTCCGCCATGCCGAGACCTCCATTATAGCCGCTACCGGCTCCGGCACCGTCCCCGCCGCCCCCGTCTCCTCCGTTGGGCCCTCCGCTCCCTCCTCCGAGCCCATGGTCGCCTGCCCCGTCACGGCGGTCGGCGCTCAGGGAATGTTCGCCGTGCCGCCGCAGCCGAGTTGCCGGCTCGACCTTTCCCCGCCGCCTGGGATGGAGTTCGCGGTGAACGGTTACCGGCACATGCCGTTCACTGCGCTTCTGTTGCAGCCGGCGACGGCGGACGAAAATCAGAACGACGAGTCTCTCGGCGAACAATGA 558 0.672 MTSQVVLHNNFETKPSATVTTIVESPSVAPPSLAVAKRPSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAETSIIAATGSGTVPAAPVSSVGPSAPSSEPMVACPVTAVGAQGMFAVPPQPSCRLDLSPPPGMEFAVNGYRHMPFTALLLQPATADENQNDESLGEQ 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01230 185 Pfam TCP family transcription factor 40 115 IPR017887 -
Gma13g01230 185 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 29 115 IPR005333 GO:0003700
Gma13g01230 185 ProSiteProfiles TCP domain profile. 41 95 IPR017887 -
Gma13g01230 185 MobiDBLite consensus disorder prediction 30 50 - -
Gma13g01230 185 PANTHER TRANSCRIPTION FACTOR TCP16-RELATED 29 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01230 Gma-Chr13 26608420 26609127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01230 41 172 TCP Transcription Factor Family AT2G37000 59.091 8.77e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gma13g01230 TCP 1.2e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01230 - - gmx:100811316 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00521 10 5309614 5310450 Gma13g01230 13 26608420 26609127 GST