Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01215 ATGGCACAGAATTCCGAGGAGATAAAGACAGTTGAGCAGTGGAGATGGTCTGAAATGCAAGGCCTTGAGCTTATGTCTTCTTCTGCTCCTGTTTCTAACTCACATGAATCCAACCCAACATTGGAAGAAGAAAGGGTAATGGAGGAGGCTTCTTCGGTGGAAAAGAAAGAGGGTGTTCCTAATGGTACTCGTGATGGTGGTGGGGAGAAGAAGAAGGGTGAGACTGTTGCTTCTGTTTGGTTTGGTGAGCTTTTCAGATTTGCCGATGGGTTGGATTACATTCTAATGGCAATTGGAACTGTTGGAGCATTTGTACATGGCTGTTCGTTGCCACTTTTTCTTCGGTTCTTTGCTGATCTTGTGAATTCCTTTGGTTCCAATGCGAATGACTTGGACAAGATGACTCAGGAAGTGGTGAAGTATGCGTTTTATTTCTTGGTGGTGGGGGCTGCTATATGGGCATCCTCGTGGGCAGAGATTTCGTGCTGGATGTGGACAGGTGAACGGCAATCAACGAGGATGAGGATCAGGTATCTTGAGGCAGCGTTGGACCAGGACATTCAATTCTTTGACACCGAGGTTAGGACATCTGATGTTGTTTTTGCCATCAACACTGATGCTGTTATGGTACAAGATGCCATTAGCGAGAAGTTGGGTAATTTCATTCACTACATGGCTACATTTGTTTCTGGATTTGTTGTGGGTTTCACTGCGGTTTGGCAATTGGCACTGGTTACCCTAGCTGTGGTCCCTATAATAGCAGTGATCGGAGGCATTCACACCACCACCTTGGCCAAACTATCTAGTAAAAGCCAGGAAGCTCTTTCTCAAGCTGGTAACATTGTGGAACAGACTGTTGTTCAAATTCGAGTGGTGTTGGCGTTTGTTGGGGAGACTAGAGCACTACAGGGCTATTCATCTGCGTTGAGAATTGCACAGAAGATTGGGTACAGGATTGGATTTGCAAAGGGAATGGGATTGGGGGCCACTTACTTTGTTGTTTTCTGTTGCTATGCTCTTCTGCTTTGGTATGGAGGCTACTTGGTTAGGCACCACTACACCAATGGAGGACTTGCCATTACCACCATGTTTTCTGTTATGATTGGTGGATTGGCTTTAGGCCAGTCTGCACCCAGCATGGCTGCATTTACAAAGGCAAGAGTTGCTGCTGCAAAGATTTTTCGTGTGATTGATCACAAGCCGGGTATAGACAGAAAGAGTGAATCAGGTTTGGAGTTAGAGAGTGTTACAGGACTAGTAGAGCTGAGAAATGTGGACTTTTCCTACCCCTCAAGGCCAGAGTTTATGATCCTTCACAATTTCTCCTTGAATGTGCCTGCTGGCAAGACCATTGCTTTGGTTGGAAGCAGTGGATCAGGTAAAAGCACAGTTGTGTCCCTCATTGAGAGATTCTATGATCCTTCTTCAGGACAAGTATTGCTAGATGGTCATGATGTTAAGTCATTGAAGCCTAGATGGTTGAGACAGCAAATAGGATTAGTGAGTCAAGAGCCTGCTTTATTTGCTACCACAATTCGAGAAAACATACTCTTGGGTAGGCCTGATGCAAACCAGGTTGAGATTGAAGAAGCTGCAAGAGTGGCTAATGCTCATTCCTTCATCATCAAACTTCCCGAAGGTTATGAAACTCAGGTGGGGGAGAGAGGGCTGCAACTTTCAGGAGGACAAAAGCAGAGAATAGCAATTGCAAGAGCAATGCTGAAAAACCCTGCAATTCTTCTCCTAGACGAGGCAACAAGTGCATTGGACTCAGAATCAGAAAAGCTGGTTCAGGATGCCCTTGATCGGTTCATGATTGGTAGAACAACTCTTGTAATTGCTCATCGACTCTCCACAATTTGCAAAGCTGACCTTGTGGCTGTGCTTCAGCAAGGAAGTGTTACTGAAATTGGAACTCATGATGAGCTCTTTGCCAAAGGTGAAAATGGAGTCTATGCCAAGCTTATCCGGATGCAGGAGATGGCACATGAAACTTCTATGAATAATGCCAGAAAGAGTAGTGCAAGGCCTTCAAGTGCCAGAAACTCTGTAAGCTCACCTATAATTGCACGGAATTCTTCTTATGGTCGATCACCGTACCCACGCAGATTATCTGACTTCTCTACATCTGATTTTAGCTTGTCTCTTGATGCATCTCATCCAAATCACAGGCTTGAAAAGCTTGCCTTCAAAGATCAAGCTAGTTCATTCTGGCGACTTGCAAAAATGAACTCTCCTGAATGGCTTTATGCCTTAATTGGTTCTGTAGGATCTGTTGTTTGTGGATCCCTTAGTGCATTTTTTGCTTATGTCCTTAGTGCTGTCCTCAGTGTCTATTACAATCCAAATCACAGACACATGATCCAAGAAATTGAAAAGTACTGCTACTTGTTGATTGGACTATCATCAGCTGCACTCCTCTTCAACACATTGCAGCACTCCTTCTGGGATATTGTTGGTGAAAATCTTACAAAACGAGTAAGGGAGAAAATGCTGACTGCTGTGCTTAAAAATGAAATGGCATGGTTTGATCAGGAGGAAAATGAGAGTGCTAGGATTGCAGCAAGGCTATCTCTTGATGCCAACAATGTCAGATCAGCCATTGGAGACAGGATTTCAGTAATTGTGCAGAACACTGCACTTATGCTAGTTGCCTGCACTGCAGGGTTTGTATTGCAATGGCGGCTTGCGCTTGTACTAGTAGCTGTCTTCCCTGTTGTTGTTGCAGCCACAGTTTTGCAGAAAATGTTCATGACTGGTTTCTCTGGTGACCTGGAAGCTGCTCATGCCAAGGCCACGCAACTAGCAGGAGAGGCTATAGCCAATGTAAGGACAGTTGCTGCTTTCAATTCAGAAAAGAAAATTGTTGGCCTTTTCACTTCCAACCTTGAAACTCCACTGCGGCGCTGCTTTTGGAAGGGACAAATTTCTGGAAGTGGATATGGGATAGCTCAATTTGCACTCTATGCTTCCTATGCACTTGGTCTTTGGTATGCTTCTTGGCTTGTGAAGCATGGTATATCTGATTTCTCTAACACAATCCGAGTTTTTATGGTACTCATGGTCTCAGCTAATGGTGCTGCTGAAACTTTAACCCTGGCTCCTGACTTCATCAAGGGTGGTCACGCCATGAGATCAGCCTTTGATCTCCTTGACCGAAGAACTGAGATTGAACCAGATGATCCAGATGCTACCCCTGTCCCTGATAGCCTTCGTGGTGAAGTAGAGCTTAAGCATGTTGATTTCTCTTATCCAACTAGACCAGATATGTCAGTTTTTCGCAACCTTAGTCTTCGTGCTAGGGCAGGTAAAACTCTTGCTCTAGTAGGGCCTAGTGGCTGTGGTAAGAGCTCAGTCATTGCACTTATACAAAGGTTCTATGATCCAACATCTGGCCAGGTCATGATTGATGGAAAGGACATAAGGAAATACAATCTCAAGTCTCTTAGAAGGCACATTGCTGTGGTACCTCAGGAGCCATGCCTATTTGCTACTACTATTTATGAGAACATCGCTTATGGACATGACTCAGCTTCTGACGCTGAGATCATAGAGGCTGCAACTCTTGCCAATGCACACAAGTTCATATCTTCTCTGCCTGATGGATACAAGACATTTGTTGGTGAGAGGGGAGTTCAACTATCAGGAGGACAAAAGCAAAGAATAGCAATTGCTAGAGCTTTTGTGAGAAAAGCAGAACTTATGCTTCTTGATGAGGCAACAAGTGCACTTGATGCTGAATCTGAGAGGTCTGTTCAGGAGGCATTAGAACGCGCCTGCTCGGGAAAAACTACTATCATTGTTGCACACAGGCTATCCACTATTAGAAATGCTAATCTCATTGCAGTGATTGATGATGGGAAAGTGGCAGAGCAAGGCTCCCATTCACAGTTGTTAAAAAATCACCCTGATGGGATCTATGCACGCATGATTCAATTACAAAAGTTCACAAATAACCAAGTCATTGGGATGGCCTCAGGTTCAAGTTCTTCTGCAAGGGCACAAGATGATGAAAGAGAAGGCTAA 4026 0.4449 MAQNSEEIKTVEQWRWSEMQGLELMSSSAPVSNSHESNPTLEEERVMEEASSVEKKEGVPNGTRDGGGEKKKGETVASVWFGELFRFADGLDYILMAIGTVGAFVHGCSLPLFLRFFADLVNSFGSNANDLDKMTQEVVKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTRMRIRYLEAALDQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGFTAVWQLALVTLAVVPIIAVIGGIHTTTLAKLSSKSQEALSQAGNIVEQTVVQIRVVLAFVGETRALQGYSSALRIAQKIGYRIGFAKGMGLGATYFVVFCCYALLLWYGGYLVRHHYTNGGLAITTMFSVMIGGLALGQSAPSMAAFTKARVAAAKIFRVIDHKPGIDRKSESGLELESVTGLVELRNVDFSYPSRPEFMILHNFSLNVPAGKTIALVGSSGSGKSTVVSLIERFYDPSSGQVLLDGHDVKSLKPRWLRQQIGLVSQEPALFATTIRENILLGRPDANQVEIEEAARVANAHSFIIKLPEGYETQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKLVQDALDRFMIGRTTLVIAHRLSTICKADLVAVLQQGSVTEIGTHDELFAKGENGVYAKLIRMQEMAHETSMNNARKSSARPSSARNSVSSPIIARNSSYGRSPYPRRLSDFSTSDFSLSLDASHPNHRLEKLAFKDQASSFWRLAKMNSPEWLYALIGSVGSVVCGSLSAFFAYVLSAVLSVYYNPNHRHMIQEIEKYCYLLIGLSSAALLFNTLQHSFWDIVGENLTKRVREKMLTAVLKNEMAWFDQEENESARIAARLSLDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWRLALVLVAVFPVVVAATVLQKMFMTGFSGDLEAAHAKATQLAGEAIANVRTVAAFNSEKKIVGLFTSNLETPLRRCFWKGQISGSGYGIAQFALYASYALGLWYASWLVKHGISDFSNTIRVFMVLMVSANGAAETLTLAPDFIKGGHAMRSAFDLLDRRTEIEPDDPDATPVPDSLRGEVELKHVDFSYPTRPDMSVFRNLSLRARAGKTLALVGPSGCGKSSVIALIQRFYDPTSGQVMIDGKDIRKYNLKSLRRHIAVVPQEPCLFATTIYENIAYGHDSASDAEIIEAATLANAHKFISSLPDGYKTFVGERGVQLSGGQKQRIAIARAFVRKAELMLLDEATSALDAESERSVQEALERACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLKNHPDGIYARMIQLQKFTNNQVIGMASGSSSSARAQDDEREG 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01215 1341 SUPERFAMILY ABC transporter transmembrane region 739 1062 IPR036640 GO:0005524|GO:0016021
Gma13g01215 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1066 1314 IPR027417 -
Gma13g01215 1341 MobiDBLite consensus disorder prediction 26 71 - -
Gma13g01215 1341 MobiDBLite consensus disorder prediction 664 685 - -
Gma13g01215 1341 CDD ABC_6TM_Pgp_ABCB1_D1_like 96 393 - -
Gma13g01215 1341 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 96 1318 IPR039421 -
Gma13g01215 1341 SUPERFAMILY ABC transporter transmembrane region 84 404 IPR036640 GO:0005524|GO:0016021
Gma13g01215 1341 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1075 1311 IPR003439 GO:0005524
Gma13g01215 1341 Gene3D - 1066 1322 IPR027417 -
Gma13g01215 1341 PANTHER ABC TRANSPORTER B FAMILY MEMBER 1 96 1318 - -
Gma13g01215 1341 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 97 385 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g01215 1341 CDD ABC_MTABC3_MDL1_MDL2 1075 1314 - -
Gma13g01215 1341 CDD ABC_MTABC3_MDL1_MDL2 420 659 - -
Gma13g01215 1341 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 420 656 IPR003439 GO:0005524
Gma13g01215 1341 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 752 1039 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g01215 1341 Pfam ABC transporter transmembrane region 97 369 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g01215 1341 Pfam ABC transporter transmembrane region 753 1022 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g01215 1341 ProSitePatterns ABC transporters family signature. 559 573 IPR017871 GO:0005524
Gma13g01215 1341 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 411 659 IPR027417 -
Gma13g01215 1341 Pfam ABC transporter 438 587 IPR003439 GO:0005524
Gma13g01215 1341 Pfam ABC transporter 1094 1242 IPR003439 GO:0005524
Gma13g01215 1341 MobiDBLite consensus disorder prediction 38 71 - -
Gma13g01215 1341 CDD ABC_6TM_Pgp_ABCB1_D2_like 741 1057 - -
Gma13g01215 1341 Gene3D ABC transporter type 1, transmembrane domain 143 1046 IPR036640 GO:0005524|GO:0016021
Gma13g01215 1341 Gene3D - 418 683 IPR027417 -
Gma13g01215 1341 ProSitePatterns ABC transporters family signature. 1214 1228 IPR017871 GO:0005524
Gma13g01215 1341 SMART AAA_5 1102 1294 IPR003593 -
Gma13g01215 1341 SMART AAA_5 447 633 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01215 Gma-Chr13 26396616 26403408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01215 69 1336 Calmodulin-binding Proteins AT2G36910 87.628 0.0 2283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01215 K05658 - gmx:100806508 2525.74