Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01196 ATGGCTAAGGGAATCAGAAACCTAAGTTCGTGGATGGAGGTTGCCCCGGCACCAATAATTTTCCCAACAAAGCCTTCTAATTCGCCTGCTTTGGAGACCATCACAGAAGAAGTTGCTGAGGAACACAATGATAAAGCTTCAATGAATACCCTTCTCAACACTCGGAAATTTCTGGCGATCTCTGCGTTTTCCCCTATTTTTTCTGAATCCCACAGAATGGCATCCAACAGGGGTCAAGGTGGAATTCAGCAGTTGTTGGCTGCTGAACAAGAGGCACAACGGATTGTGAATGCTGCAAAAAATGaaaaattggctaggttgaaacaggccaaggaagaggCTGAAAAGGAGATTGCTGAATACCGAGCTCAACTAGAGGCTGAGTTTCAAAAGAAAGTGTCAGACAGTACTGGAGATTCTGGAGCTAATGTCAAGCGGCTTGAGCAAGAGACCGAAGAAAAAATCCATCACCTGAAAACGGAGGCTGCAAGAATATCGGATGATGTTGTCGCCATGCTCCTCAAATATTCTGGTGCGGGTGAGCTTCTTGTTTTGGTTACAACGCTTAGTACCTTGCTGCATTGGACAGGTGGGTCTGAAGCTTGCTTTAGTGGCTTCAGGATTGGGCTTGGCCTAGAAACAACTATAGCAAAATATAACAAGTAA 666 0.4264 MAKGIRNLSSWMEVAPAPIIFPTKPSNSPALETITEEVAEEHNDKASMNTLLNTRKFLAISAFSPIFSESHRMASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEIAEYRAQLEAEFQKKVSDSTGDSGANVKRLEQETEEKIHHLKTEAARISDDVVAMLLKYSGAGELLVLVTTLSTLLHWTGGSEACFSGFRIGLGLETTIAKYNK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01196 221 Pfam Vacuolar (H+)-ATPase G subunit 79 176 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma13g01196 221 Coils Coil 82 131 - -
Gma13g01196 221 Coils Coil 148 168 - -
Gma13g01196 221 Gene3D - 72 177 - -
Gma13g01196 221 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 78 175 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma13g01196 221 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 73 177 IPR005124 GO:0016471|GO:0046961|GO:1902600
Gma13g01196 221 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 73 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01196 Gma-Chr13 26181536 26191079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01196 73 176 Primary Pumps ATPases(2) AT3G01390 74.038 2.22e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01196 K02152 - gmx:100306550 171.014