Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01195 ATGCAAATTATCTCTCACTCTTCCTTCTTTCTTCTTCTGTTATTCCTTTTCTTATGCAGTAATGCAAACGGGTTCGGCGCAATGGGACCAATCTCTGCGTCGTTCGGAAAAGACGAGGTTTTTTGCTCCATCGATGCCAGTGGAAAGCAGGACGTTATTTGCTGGGGGAGCAACGCCACGTCACCGTCGCTCTCAACCGTCAGCAACGCCCTCCCTGCCATGTCAGCACTCTCCGGCGGGGAGGGATTTCTCTGCGGCATTTTAGCGAACACCTCGCAAGCCTTTTGCTGGAGTGCTGTAACCAGACCGAGCGCAGATCTAATCCTCGTGCCTCCGGCGTACCGGAACACCGCCTATTCCCAAGTCGCCGCCGGAAAGAGCCACGTCTGCGCCATCCGGGGATCCTACTACGCCGATCGCGATTCCGGCACCGTTGACTGCTGGGAAATCACGAAAACCGCCAACAAAACGTTGACAGCGAAACAGAGTGATAAGTTCATCGACCAATTAATATCGAATCTGGAGGTGAAGAGGGTTGTTTCCGGTGAAGGCTTCACCTGCGGCGAGGTAAACGACGGTGGACTAATCTGCTGGGGACCCACTTCGGAAAATTTGGGAAACATTTCCAATGTTTCCGACACCTTCGCGGTTCTGGCGGCGGGTCGGAGCGCCGTGTGCGGCGTTTTCAACGTTTCCGGCGAGTTAAAATGCTGGGGCGACCCGGTTTCGTTTTCGGACCCTCCGCTAGATTCGGTTCGGTTAGTCTCTCTATCCGCCGGGGCCAACCATTTCTGCGGCGTGAGAATGGATAACCATGAAGTTGAATGCTGGGGTGATTTGAATTCTTCGGTTATTCCAAAAGGTAATGGCTTTATGGCTATTGCTTCTTCGGATTTCACCACGTGCGGGATCAGGGAAGATGATCTTCTTCTGGATTGTTGGTTGGTCAACGCTTCAAAACCCGATTTTGATCCTCCTTTGGAACTTTCGAGCCCTGGACTCTGTAGGGCTAGTGAGTGTGGGGTTGATGAGTTTGCTTTCAATGTGAGTGTGCTCAATGAGCTAGCTTTGACGAGCGTGTGTGTTAGAGAGGATTTGAGGATTTGTTCGCCTTGTGGGTCAAATTGTTCCAAAGGGTTCTTCTTGTCTAGTGAATGTTCTAGGAATGCTGATAGAGTTTGCACTGCTTGTTCTCTTTGTCAGAACAGTTCTTGTTTTGGTGTTTGTGGACTCCACTCCTCATCGGGGCAGCATTTGCATTTGCATTGGCATCATTTACGTAAATGGGTGGTGATAGTTGGGTGTCCAGTGTTGGGGTTTTTGGTTATTTTGCTTTGTGGGTGTCTTTTTATGGTTAGAAAGAGGACTAAGAAGCAATCCAAGTCTTGCATCGGGAAACCGGATCAGGAGGAAGATCATGTGAATGTTGCTCTTAACTCTACTCTTTCAGTTAATTCGTGCCCCGGTGCGCCTCAGGTTTTCAGGCTCTCTGAGCTTAAGGATGCTACTAATGGGTTTAAGGAGTTTAATGAACTTGGGAGGGGGAGTTATGGGTTTGTGTATAAGGCTGCATTAGCTGATGGGAGAGTGGTTGCTGTTAAAAGAGCGAATGCTGCTACCATAATTCACACCAACAACCGCGATTTTGAAACGGAGCTGGAGATTCTCTGCAAAATTCGACACTGTAATGTTGTCAACTTGTTGGGGTATTGCGCGGAGATGGGGGAGAGGTTGCTTGTCTACGAGTATATGCCTCACGGGACGCTCTATGATCACCTCCACGGTGGTCTTTCTCCGCTGAATTGGAGCCTCAGGTTGAAGACAGCGATGCAGGCCGCGAAGGGGCTTGAGtaccttcacaaggaacttgttcctcccattgtgcacaaggatctcaagagttccaacattctcttggattcggagtggggggcaaggatttcagactttggACTTCTTGCTTCTAGTGACAAGGATCTCAACGGGGACCTAGAAAGTGATGTTTACAATTTTGGGATTGTGTTGCTTGAGATTCTGAGTGGAAGGAAGGCTTATGATAGGGATTACACTCCACCCAACGTGGTTGAGTGGGCAGTGCCTTTGATCAAACAAGGGAAAGGTGCTGCTATAATTGATAGGTATGTGGCTCTTCCAAGAAATGTTGAGCCTTTGCTCAAGCTTGCTGATATAGCAGAGCTTGCTGTGAGAGAAAATCCAAGTGAGCGTCCACCTATGTCAGATATAGCATCTTGGTTGGAGCAAATTGTGAAGGACGGATTGTTCTTATAG 2289 0.4688 MQIISHSSFFLLLLFLFLCSNANGFGAMGPISASFGKDEVFCSIDASGKQDVICWGSNATSPSLSTVSNALPAMSALSGGEGFLCGILANTSQAFCWSAVTRPSADLILVPPAYRNTAYSQVAAGKSHVCAIRGSYYADRDSGTVDCWEITKTANKTLTAKQSDKFIDQLISNLEVKRVVSGEGFTCGEVNDGGLICWGPTSENLGNISNVSDTFAVLAAGRSAVCGVFNVSGELKCWGDPVSFSDPPLDSVRLVSLSAGANHFCGVRMDNHEVECWGDLNSSVIPKGNGFMAIASSDFTTCGIREDDLLLDCWLVNASKPDFDPPLELSSPGLCRASECGVDEFAFNVSVLNELALTSVCVREDLRICSPCGSNCSKGFFLSSECSRNADRVCTACSLCQNSSCFGVCGLHSSSGQHLHLHWHHLRKWVVIVGCPVLGFLVILLCGCLFMVRKRTKKQSKSCIGKPDQEEDHVNVALNSTLSVNSCPGAPQVFRLSELKDATNGFKEFNELGRGSYGFVYKAALADGRVVAVKRANAATIIHTNNRDFETELEILCKIRHCNVVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKTAMQAAKGLEYLHKELVPPIVHKDLKSSNILLDSEWGARISDFGLLASSDKDLNGDLESDVYNFGIVLLEILSGRKAYDRDYTPPNVVEWAVPLIKQGKGAAIIDRYVALPRNVEPLLKLADIAELAVRENPSERPPMSDIASWLEQIVKDGLFL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01195 762 ProSiteProfiles Protein kinase domain profile. 506 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01195 762 Gene3D Phosphorylase Kinase; domain 1 470 583 - -
Gma13g01195 762 SMART serkin_6 506 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01195 762 PANTHER OS01G0750732 PROTEIN 28 760 - -
Gma13g01195 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Gma13g01195 762 Pfam Protein tyrosine and serine/threonine kinase 510 656 IPR001245 GO:0004672|GO:0006468
Gma13g01195 762 Gene3D Transferase(Phosphotransferase) domain 1 584 660 - -
Gma13g01195 762 Gene3D Transferase(Phosphotransferase) domain 1 661 759 - -
Gma13g01195 762 SUPERFAMILY RCC1/BLIP-II 49 308 IPR009091 -
Gma13g01195 762 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Gma13g01195 762 SUPERFAMILY Protein kinase-like (PK-like) 483 753 IPR011009 -
Gma13g01195 762 Gene3D - 26 167 IPR009091 -
Gma13g01195 762 Gene3D - 168 347 IPR009091 -
Gma13g01195 762 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR1 28 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01195 Gma-Chr13 26170178 26172719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01195 12 754 Receptor kinase-like Gene Family AT3G59420 30.902 4.86e-110 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gma13g01195 PK_Tyr_Ser-Thr 3.8e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01195 - - gmx:100802259 1521.14