Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01184 ATGGCTTCCCAAAACCCAGCGGAGGAAGAAAATTCAAAGCGACATTGGTCCCTTGAAGACTTCGAGATCGGAAAACCTCTCGGTAGGGGCAAATTCGGTAGAGTTTACGTCGCCAGAGAAGTTAAGAGCAAATTTGTTGTGGCGTTGAAGGTTATATTTAAGGAACAAATTGATAAGTACAGAGTTCATCACCAACTGAGGAGAGAGATGGAGATACAGACCAGTCTCCGGCACGCAAACATCCTGCGTCTTTACGGTTGGTTTCATGATGCTGACCGTGTTTTCTTGATTCTTGAGTATGCTCATAAGGGAGAGCTTTACAAGGAGCTGAGAAAAAAGGGTCATCTCACTGAGAAGCAAGCTGCCACGTATATTTTGAGCCTCACAAAGGCGTTGGCATATTGTCATGAGAAACATGTTATTCATAGGGATATCAAGCCAGAAAATTTGTTGCTTGACCATGAGGGGCGTCTTAAAATTGCAGACTTTGGTTGGTCTGTTCAGTCTAGAAGCAAAAGACATACCATGTGTGGAACATTGGATTATTTAGCACCAGAAATGGTTGAAAACAAAGCTCATGACTATGCAGTTGACAACTGGACTTTGGGTATCCTTTGTTATGAGTTCCTCTATGGTGCTCCTCCATTTGAGGCTGAGAGTCAATCTGATACCTTCAAAAGGATAATGAAGGTTGATCTAAGCTTCCCTTCCACCCCTTCTGTCTCTATAGAGGCGAAAAATCTGATTAGTCGGCTCCTGGTGAAAGACTCCTCACGAAGGCTCTCTCTTCAGAAGATAATGGAGCATCCTTGGATAATCAAGAATGCAGATTTTGTGGGTATTTGCTAG 849 0.4323 MASQNPAEEENSKRHWSLEDFEIGKPLGRGKFGRVYVAREVKSKFVVALKVIFKEQIDKYRVHHQLRREMEIQTSLRHANILRLYGWFHDADRVFLILEYAHKGELYKELRKKGHLTEKQAATYILSLTKALAYCHEKHVIHRDIKPENLLLDHEGRLKIADFGWSVQSRSKRHTMCGTLDYLAPEMVENKAHDYAVDNWTLGILCYEFLYGAPPFEAESQSDTFKRIMKVDLSFPSTPSVSIEAKNLISRLLVKDSSRRLSLQKIMEHPWIIKNADFVGIC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01184 282 PIRSF ILK 1 275 - -
Gma13g01184 282 ProSiteProfiles Protein kinase domain profile. 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01184 282 Gene3D Transferase(Phosphotransferase) domain 1 105 278 - -
Gma13g01184 282 SMART serkin_6 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01184 282 CDD STKc_Aurora 20 272 - -
Gma13g01184 282 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Gma13g01184 282 SUPERFAMILY Protein kinase-like (PK-like) 13 275 IPR011009 -
Gma13g01184 282 Gene3D Phosphorylase Kinase; domain 1 9 104 - -
Gma13g01184 282 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 5 277 IPR030616 GO:0004672
Gma13g01184 282 ProSitePatterns Protein kinases ATP-binding region signature. 27 54 IPR017441 GO:0005524
Gma13g01184 282 Pfam Protein kinase domain 21 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01184 Gma-Chr13 26032032 26034825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01184 8 277 CBL-interacting serine-threonine protein kinases AT5G25110 38.768 9.64e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Gma13g01184 Pkinase 2e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01184 K08850 - gmx:100800111 575.859