Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01182 ATGGCCGACGACTTCGAATTCTCCGACAAAGTCCCTCCTTCCTTCGATCGCGTGGGTTCAAAAGGGTTCAACCCAGCATTAATTGTTCTCCTTCTTGTTGGTGGGTTGCTGTTGATATTCCTCGTTGGAAATTATGTACTATACACATATGCACAGAAGACCCTCCCTCCTAGAAAAAAAAAGCCAATCTCAAAGAAGAAGATGAAAAAGGAGAGACTGAAGCAGGGCGTCTCTGCACCTGGAGAGTAG 249 0.4578 MADDFEFSDKVPPSFDRVGSKGFNPALIVLLLVGGLLLIFLVGNYVLYTYAQKTLPPRKKKPISKKKMKKERLKQGVSAPGE 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01182 82 PANTHER DNA-BINDING PROTEIN S1FA2 3 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma13g01182 82 Pfam DNA binding protein S1FA 19 82 IPR006779 GO:0003677|GO:0005634|GO:0006355
Gma13g01182 82 MobiDBLite consensus disorder prediction 59 82 - -
Gma13g01182 82 PANTHER DNA-BINDING PROTEIN S1FA1-RELATED 3 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01182 Gma-Chr13 26007932 26010576 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Gma13g01182 S1FA 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01182 - - gmx:100500343 145.206