Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01168 ATGCTAACGGATTTTATCTTATCATATATTTTAAAAAATAGTAAGAGATCCGGCAGAAACCTTCTTggagaagaaatggagaatagggtacccttcttcttcttcttcttgttctctttctcactcctgctgctacttctcttggaactttcttctGCTCAGATGCCAGGTTTTGTAAGTTTGGATTGTGGTGGTAAAGAAAATTTTACAGATGAAATTGGTCTTAATTGGACTCCCGACAAACTTAGGTATGGAGAAATAAGCAATATATCTGTTGCCAATGAGACACGGAAGCAATACACAGCACTACGACATTTTCCTGCTGATTCCAGAAAATACTGCTACACACTTGATGTTGTTAGTAGGACAAGGTACCTACTGAGAGCGTCATTCTTGTACGGGAACTTTGATGCAAACAATGTTTATCCAAAATTTGACATTTTTATTGGTGCTACTCATTGGTCGACTATAGTTATATCTGATGCTAACACTATAGAAATGAGAGAGCTTATATTTTTGGCTTTAAGTCCTACAGTCAGTGTATGTTTATCAAATGCAACAACTGGGAAGCCATTCATATCTACGCTTGAACTCCGGCAATTCAATGGTTCAGTTTATTATACGTACACTGAGGAACACTTTTACCTCAGTGTCTCTGCAAGGATAAATTTTGGTGCAGATAGTGATGCCCCAATCAGGTATCCTGATGACCCATTTGATAGAATTTGGGAGTCAGATTCTGTCAAGAAAGCAAATTATCTTGTTGATGTTGCTGCCGGAACTAGGAAAATTTCCACAAACAAATCAATTGATGTTAACAGTGATGAAATGCCACCGATGAAAGTAATGCAGACTGCTGTGGTGGGCACAAACGGATCTCTAACTTACCGTTTGAATTTGGATGGTTTTCCTGGTTTTGCATGGGCATTTACCTATTTTGCAGAAATTGAAGATTTGGCTGAAAATGAATCCAGAAAATTCAGGCTAGTACTTCCCGGTCATTCAGATATTAGCAAGGCTGTGGTAAATATTGAAGAAAATGCTCCAGGAAAATATCGCCTTTACGAACCAGGATATACCAATTTATCCCTACCCTTTGTTTTGTCCTTTAGATTTGGCAAAACATCTGATTCTTCTAGGGGCCCTCTTCTAAATGCCATGGAGATTAATGAGTATTTGGAGAAAAATGATGGCTCTCCTGATGGAGAAGTGATATCTAGTGTACTTTCACACTACTTCTCAGCTGATTGGGCACAAGAAGGGGGTGACCCGTGTCTACCTGTTCCATGGTCATGGGTCCGCTGTAGCTCAGATCAACAGCCAAAAATAATTTCAATTTTGTTGTCTAGTAAAAACTTGACCGGCAATATTCCTTTGGACATAACGAAATTGACTGGTTTGGTTGAACTACGGCTTGATGGTAATATGTTGACTGGCCCAATACCAGATTTCACGGGATGCATGGACTTAAAGATCATTCATCTTGAGAACAATCAGTTGACAGGTGCACTCTCAACCTCTTTGGCGAACCTTCCAAATTTGAGGGAACTGTATGTCCAAAATAATATGTTATCCGGAACTGTACCATCGGATCTTCTGAGTAAAGATTTGGATTTGAACTACACTGGAAACACTAATCTTCATAAAGGTAGCAGAAAAAAGAGTCACTTGTATGTGATTATTGGTTCAGCAGTTGGGGCTGCTGTTCTACTTGTGGCCACTATTATATCGTGCTTGGTTATGCGTAAAGGAAAGACAAAATATTACGAACAAAACAGCCTTGTTTCTCACCCTTCTCAGAGTATGGATTCTTCTAAGAGCATTGGTCCTTCTGAAGTGGCACACTGCTTCAGCTTTTCTGAAATTGAAAATTCTACAAATAATTTTGAGAAAAAAATTGGTTCCGGAGGTTTTGGAGTTGTTTACTATGGGAAACTGAAAGATGGAAAAGAGATAGCAGTTAAAGTTCTAACCAGCAATTCCTATCAGGGAAAACGAGAGTTCTCCAATGAGGTAACTCTTCTCTCAAGAATACATCATAGAAACTTGGTACAGCTTCTCGGGTATTGTCGAGAAGAAGGAAATAGCATGCTTATTTATGAGTTCATGCATAATGGAACTCTCAAGGAACATCTTTATGGCCCATTAACACATGGACGGAGCATCAATTGGATGAAGCGCCTTGAGATTGCAGAAGACTCTGCAAAAGGGATTGAGTATCTTCACACAGGCTGTGTTCCTGCTGTCATCCATCGAGACTTAAAAAGCAGCAACATTCTTCTTGACAAACACATGAGAGCCAAGGTTTCAGATTTTGGTCTCTCAAAACTTGCTGTGGATGGAGCCTCCCATGTGTCAAGCATAGTTCGTGGGACGGTAGGATATTTGGATCCCGAGTACTATATTTCCCAGCAGCTTACTGACAAGAGTGATATTTATAGTTTTGGTGTAATTCTTCTTGAACTCATATCTGGTCAAGAAGCAATATCTAATGACAGCTTTGGTGCTAATTGCCGAAACATAGTCCAGTGGGCAAAATTACACATTGAGAGTGGAGATATACAAGGTATTATTGATCCTGTGCTACAAAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAGGCATTAATGTGTGTTCAACCACATGGACATATGCGACCATCAATTTCAGAAGTTCTGAAGGAGATCCAAGATGCAATTGCTATTGAGAGAGAGGCTGAAGGTAATTCGGATGAGCCAAGAAATTCAGTTCATTCTTCAATCAACATGGGTTCTATGGATTTGGCTGCAACTGAGAACTACCTCTCAATTGATGAATCCATTGCACAGCCTATTGCACGATAG 2853 0.3831 MLTDFILSYILKNSKRSGRNLLGEEMENRVPFFFFFLFSFSLLLLLLLELSSAQMPGFVSLDCGGKENFTDEIGLNWTPDKLRYGEISNISVANETRKQYTALRHFPADSRKYCYTLDVVSRTRYLLRASFLYGNFDANNVYPKFDIFIGATHWSTIVISDANTIEMRELIFLALSPTVSVCLSNATTGKPFISTLELRQFNGSVYYTYTEEHFYLSVSARINFGADSDAPIRYPDDPFDRIWESDSVKKANYLVDVAAGTRKISTNKSIDVNSDEMPPMKVMQTAVVGTNGSLTYRLNLDGFPGFAWAFTYFAEIEDLAENESRKFRLVLPGHSDISKAVVNIEENAPGKYRLYEPGYTNLSLPFVLSFRFGKTSDSSRGPLLNAMEINEYLEKNDGSPDGEVISSVLSHYFSADWAQEGGDPCLPVPWSWVRCSSDQQPKIISILLSSKNLTGNIPLDITKLTGLVELRLDGNMLTGPIPDFTGCMDLKIIHLENNQLTGALSTSLANLPNLRELYVQNNMLSGTVPSDLLSKDLDLNYTGNTNLHKGSRKKSHLYVIIGSAVGAAVLLVATIISCLVMRKGKTKYYEQNSLVSHPSQSMDSSKSIGPSEVAHCFSFSEIENSTNNFEKKIGSGGFGVVYYGKLKDGKEIAVKVLTSNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEGNSMLIYEFMHNGTLKEHLYGPLTHGRSINWMKRLEIAEDSAKGIEYLHTGCVPAVIHRDLKSSNILLDKHMRAKVSDFGLSKLAVDGASHVSSIVRGTVGYLDPEYYISQQLTDKSDIYSFGVILLELISGQEAISNDSFGANCRNIVQWAKLHIESGDIQGIIDPVLQNNYDLQSMWKIAEKALMCVQPHGHMRPSISEVLKEIQDAIAIEREAEGNSDEPRNSVHSSINMGSMDLAATENYLSIDESIAQPIAR 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01168 950 Pfam Protein tyrosine and serine/threonine kinase 629 829 IPR001245 GO:0004672|GO:0006468
Gma13g01168 950 Gene3D Phosphorylase Kinase; domain 1 600 702 - -
Gma13g01168 950 CDD STKc_IRAK 633 900 - -
Gma13g01168 950 ProSiteProfiles Protein kinase domain profile. 627 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01168 950 SUPERFAMILY Protein kinase-like (PK-like) 602 897 IPR011009 -
Gma13g01168 950 Gene3D Transferase(Phosphotransferase) domain 1 703 925 - -
Gma13g01168 950 SUPERFAMILY L domain-like 428 551 - -
Gma13g01168 950 Gene3D Ribonuclease Inhibitor 405 555 IPR032675 -
Gma13g01168 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Gma13g01168 950 PANTHER TYROSINE KINASE DOMAIN PROTEIN 41 924 - -
Gma13g01168 950 SMART serkin_6 627 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01168 950 Pfam Malectin-like domain 61 389 IPR024788 -
Gma13g01168 950 PANTHER OS07G0107800 PROTEIN-RELATED 41 924 - -
Gma13g01168 950 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01168 Gma-Chr13 25854068 25861066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01168 51 737 Receptor kinase-like Gene Family AT2G37050 68.580 0.0 987
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Gma13g01168 Malectin_like 4.4e-76 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01168 - - gmx:100798007 1811.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00458 10 4449868 4457011 Gma13g01168 13 25854068 25861066 GST
Gma19g01685 19 46164167 46171312 Gma13g01168 13 25854068 25861066 PCT
Gma03g01638 03 42514673 42521268 Gma13g01168 13 25854068 25861066 PCT
Gma13g01168 13 25854068 25861066 Gma19g01685 19 46164167 46171312 PCT
Gma13g01168 13 25854068 25861066 Gma03g01638 03 42514673 42521268 PCT