Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01159 ATGGCGGCCATAACCCGCCTCGCGAAGCGCGCGTTCGTCGTCTCTTCCCTGGCGAGGAGGTGCCTGAGCTCCTCCGTAGTCAACTGCCACGCGCCGCCGCACGACGCCACGTCGTTCCGCCCGTTTCCGCTGCGTGAAGATTCGAGCAAGCGGTGCGTGCAGTGGGTGTTCCTCGGCTGCCCCGGCGTCGGAAAAGGAACGTACGCTAGTCGCCTCTCGAACCTCCTCGGCGTCCCTCACATCGCCACCGGCGATCTCGTTCGCGACGAACTCACCTCCTCTGGCCCCCTTTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATTATTAGTTTATTGTCAAAGAGACTTGTTGCCGGGGAAGCTAAAGGCGATTTGGGATTTATTCTTGATGGTTTTCCTCGAACAATTAAGCAAGCAGAAATATTGGAAGGGGTAACTGACATTGACTTGGTAATCAATCTGAAGCTTCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGCAATCAGTGTGGGGGAAATTTTAATGTTGCTTCCATCAACATCAAGGCTGAGAATGGGAGCCCTGGAATTATTATGGCTCCACTTCTTCCTCCTGAGAATTGTATATCAAAGCTCATTACTCGATCAGATGATACTGAAGCAGTGGTCAAAGAAAGGCTTCGAATATACAATGAAATGACTCAGCCTGTGGAGGAATTTTACCGTTCAAGAGGAAAATTATTGGAGTTTAACCTGCCTGGAGGAATCCCGGAGTCTTGGCCTAAGTTGCTACATGCTCTTAATCTTGATGATTATGAGGACAAACGATCTGCTGCAGCATAA 858 0.4907 MAAITRLAKRAFVVSSLARRCLSSSVVNCHAPPHDATSFRPFPLREDSSKRCVQWVFLGCPGVGKGTYASRLSNLLGVPHIATGDLVRDELTSSGPLSSQLSEIVKQGQLVSDEIIISLLSKRLVAGEAKGDLGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASINIKAENGSPGIIMAPLLPPENCISKLITRSDDTEAVVKERLRIYNEMTQPVEEFYRSRGKLLEFNLPGGIPESWPKLLHALNLDDYEDKRSAAA 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01159 285 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Gma13g01159 285 PANTHER ADENYLATE KINASE 1 285 - -
Gma13g01159 285 TIGRFAM adk: adenylate kinase 54 272 IPR006259 GO:0004017|GO:0005524|GO:0016776
Gma13g01159 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 272 IPR027417 -
Gma13g01159 285 CDD ADK 54 256 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PANTHER NUCLEOTIDE KINASE 1 285 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PRINTS Adenylate kinase signature 220 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 PRINTS Adenylate kinase signature 237 251 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 Pfam Adenylate kinase 58 250 - -
Gma13g01159 285 Hamap Adenylate kinase [adk]. 53 273 IPR000850 GO:0005524|GO:0006139|GO:0019205
Gma13g01159 285 Gene3D - 43 276 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01159 Gma-Chr13 25775881 25779367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01159 K00939 - gmx:100777619 566.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00452 10 4356336 4376033 Gma13g01159 13 25775881 25779367 GST
Gma19g01677 19 46090530 46093427 Gma13g01159 13 25775881 25779367 PCT
Gma03g01630 03 42449844 42452001 Gma13g01159 13 25775881 25779367 PCT
Gma13g01159 13 25775881 25779367 Gma19g01677 19 46090530 46093427 PCT
Gma13g01159 13 25775881 25779367 Gma03g01630 03 42449844 42452001 PCT