Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01154 ATGGCATCTCTTGGCGTGCGACCAGTTCTTCCCCCTCCATTAACTTCCATCTCCGACCCACCTCCTCTTTTCGATGGCACCACCAGGTTGTACATCAGTTATTCTTGCCCCTATGCACAACGTGTGTGGATCGCTAGGAACTACAAGGGGCTACAAGATAAGATCAATTTGGTCCCTATTAACCTTCAAGACAGGCCAGCTTGGTATAAGGAGAAAGTCTACCCTGAAAATAAGGTGCCATCCTTGGAGCACAATGGCAAGGTGTTGGGAGAAAGTCTTGATTTGATCAAATATGTAGATGCAAACTTTGAAGGGACACCTTTGTTTCCCAGTGATCCTGCCAAGAAAGAGTTCGGTGAGCAATTGATATCCCATGTTGATACATTCAGCAAAGACCTGTTCGTTTCATTGAAAGGGGATGCTGTACAGCAAGCCAGTCCCGCTTTTGAATACTTGGAGAATGCTCTTGGTAAATTTGATGATGGGCCATTCTTGCTTGGCCAATTCAGTTTGGTGGATATTGCTTATATTCCATTTGTTGAAAGATTCCAAATTGTCTTTGCTGAGGTGTTCAAACATGACATCACAGAAGGAAGGCCTAAACTTGCAACATGGTTTGAGGAGTTGAATAAGCTAAATGCTTATACCGAGACTAGAGTCGATCCTCAGGAGATCGTTGATCTTTTCAAGAAACGCTTCCTGCCTCAACAGTGA 714 0.4412 MASLGVRPVLPPPLTSISDPPPLFDGTTRLYISYSCPYAQRVWIARNYKGLQDKINLVPINLQDRPAWYKEKVYPENKVPSLEHNGKVLGESLDLIKYVDANFEGTPLFPSDPAKKEFGEQLISHVDTFSKDLFVSLKGDAVQQASPAFEYLENALGKFDDGPFLLGQFSLVDIAYIPFVERFQIVFAEVFKHDITEGRPKLATWFEELNKLNAYTETRVDPQEIVDLFKKRFLPQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01154 237 SFLD Glutathione Transferase (cytosolic) 29 210 IPR040079 -
Gma13g01154 237 Gene3D - 105 236 - -
Gma13g01154 237 SUPERFAMILY Thioredoxin-like 21 108 IPR036249 -
Gma13g01154 237 CDD GST_C_Lambda 112 230 - -
Gma13g01154 237 SUPERFAMILY GST C-terminal domain-like 103 233 IPR036282 -
Gma13g01154 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Gma13g01154 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 236 IPR044629 GO:0004364
Gma13g01154 237 SFLD Main (cytGST) 29 210 - -
Gma13g01154 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 236 - -
Gma13g01154 237 Pfam Glutathione S-transferase, C-terminal domain 141 207 - -
Gma13g01154 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Gma13g01154 237 Gene3D Glutaredoxin 1 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01154 Gma-Chr13 25717016 25719474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01154 11 234 Glutathione S-transferase Gene Family AT5G02790 66.964 6.47e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01154 K00799 - gmx:547597 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00448 10 4314467 4317658 Gma13g01154 13 25717016 25719474 GST
Gma19g01672 19 46054012 46056484 Gma13g01154 13 25717016 25719474 PCT
Gma03g01625 03 42415007 42417998 Gma13g01154 13 25717016 25719474 PCT
Gma13g01154 13 25717016 25719474 Gma19g01672 19 46054012 46056484 PCT
Gma13g01154 13 25717016 25719474 Gma03g01625 03 42415007 42417998 PCT