Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01139 ATGAGATTGGTTTGCTTCGAGCCGAAAACGCAGTCGTTTTCCTTTTCCCGCCACACTCGGCCAGCATCGAGTTCAACTGCTTCACCTTCTTCCACCAGCGCGAACGAGAGCTTTGACTTTGAAGAAGCAGAAGCTCTGATACTAAAATGGAACCCTGAAACCTCTGCGTACGGAAGAGTAACCTCTCTCTTCTACAACGACAAAGCAGAGGCCACGCACTACATCCACTGCGTTAACATGCTTCAGAAAACCATGCACTCTTTGATCTCACAGAACTCTTCCTCGCCAAAACTCATTCTCGCGCATAACCTAATGCAAATTGCCATGAAGAGACTCCAGAAAGAGTTCTACCAGATATTATCAATGAACCGGGCCCACCTCAACCCCGAATCCGTCTCCACCAGATCCTCCACCACTTCAAGAACCTCTTTCTGTTCCGACAGTTACGACGACGCCACTGCCGAAGAAGATGTTCGCCAATCAGGGGATTGTATCTCCGAAGTCGAACGCGTTTCTTCTGAAGCCATGGCGGATCTCAAATCCATCGCTGACTGCATGATTTCCAACGGCTACGCGAAGGAATGTATCAGCGTGTACACGACGATGAGAAAATCGATCGTTGACGAAGGCATTTATCGCCTCAACGTGGAGCAGTTGAGCGCTTCGAAGGTTAACAAGATGCACTGGGATGTGCTCGAGTTTAAAATCAAGAGCTGGTTGGAGGCGGTTAAGATCGCCGTGAGGACGCTCTTCGCCCGAGAGAGGATCCTCTGCGATCACGTCTTCGGTGCGTCGCAATCCATCAGAGAAGCTTGCTTCGCTGATGTTTCTAGAAGCGGAGCATCTCTTTTGTTCGGATTCCCCGAACTCGTCGTGAAGACGAAGAAATCGCCGCCGGAGAAGATCTTCCGGATGATTGACATGTACGCGGCAATCGCCACGCTGTGGCTGGAGATCGAATCGATATTCTCGCTCGATTCAACAACCGCTGTTAAATCTCAAGCCTACGGTCTTCTTCTCCGACTCTCAGAGTCCGTACGAACGAGTCTATTGGAGTTTGTGACCGCAATTCAGAAAGGCTCGCCCAAATCGACGGCGAACTTCGCCGGCGTGCATTCCTTGACAGTGCAAGTGATGAATCACTTGACTACTCTCGCGGATTATAGCAACGTGCTCTCGGAAATTTTCTTAGACGTGCCACCGCCGCCGAGGTCGCCGTTGCCGGAATCTTACTTATACAGTCCGGAATCCGACGACACCACGACGACGGAGACGGAGTTCTCAGTGCAGATGGCGCGGCTTATTCTCGTCCTTCTCTGCAAGATCGACGGCAAATCGAGGCATTACAAGGAAGTTTCGTTGTCTTACCTGTTTCTCGCGAACAATCTCCGGCACGTGGTGGCGAACGTCCGTGCCTCGAACTTGCATTATGTTCTCGGCGACGATTGGGTGATGAATCACGATGCGAAGGTGAAGCGGTTGACGGCGAACTACGAGAGAGTGGCGTGGGGCAAAGTGTTTTCGTCTTTGCCGGAAAATCCAACGGCGGAAATGTCGCCGGCGGAGGCGAGGGTTATGTTCGGGAATTTCAATTTTGAATTCGAGAAAGCTTATAGGAGAGAAAACACGTTCACCGTGCCGGTACAGGATTTTCGAGAAGAGATCAAGGCGTCTCTCGCGAGAAAAATAACCCCTATTTACCGCGAGCTGTACGAAACGCACCGTATTGGACTGGGAACGGTGAGGGAAATGAGAGAGTATGTCACATTTGCCCCTGAAGATGTTGAGAATTACATGATGAATCTTTTCTCTAAGGGAAGAGCAAGCTCCGGTAATGGAGGAAACAATTCATGTTTTGTAAAGTGTAAAAAATGCAAATGA 1881 0.5013 MRLVCFEPKTQSFSFSRHTRPASSSTASPSSTSANESFDFEEAEALILKWNPETSAYGRVTSLFYNDKAEATHYIHCVNMLQKTMHSLISQNSSSPKLILAHNLMQIAMKRLQKEFYQILSMNRAHLNPESVSTRSSTTSRTSFCSDSYDDATAEEDVRQSGDCISEVERVSSEAMADLKSIADCMISNGYAKECISVYTTMRKSIVDEGIYRLNVEQLSASKVNKMHWDVLEFKIKSWLEAVKIAVRTLFARERILCDHVFGASQSIREACFADVSRSGASLLFGFPELVVKTKKSPPEKIFRMIDMYAAIATLWLEIESIFSLDSTTAVKSQAYGLLLRLSESVRTSLLEFVTAIQKGSPKSTANFAGVHSLTVQVMNHLTTLADYSNVLSEIFLDVPPPPRSPLPESYLYSPESDDTTTTETEFSVQMARLILVLLCKIDGKSRHYKEVSLSYLFLANNLRHVVANVRASNLHYVLGDDWVMNHDAKVKRLTANYERVAWGKVFSSLPENPTAEMSPAEARVMFGNFNFEFEKAYRRENTFTVPVQDFREEIKASLARKITPIYRELYETHRIGLGTVREMREYVTFAPEDVENYMMNLFSKGRASSGNGGNNSCFVKCKKCK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01139 626 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 610 IPR004140 GO:0000145|GO:0006887
Gma13g01139 626 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 610 - -
Gma13g01139 626 Pfam Exo70 exocyst complex subunit 237 599 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gma13g01139 626 MobiDBLite consensus disorder prediction 16 35 - -
Gma13g01139 626 Gene3D Exocyst complex component Exo70 60 610 - -
Gma13g01139 626 SUPERFAMILY Cullin repeat-like 41 603 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01139 Gma-Chr13 25548335 25550215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01139 40 603 EXO70 exocyst subunit family AT3G09520 53.765 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01139 K07195 - gmx:106795635 1163.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00431 10 4144430 4146298 Gma13g01139 13 25548335 25550215 GST
Gma13g01139 13 25548335 25550215 Gma19g01654 19 45923210 45925066 PCT
Gma13g01139 13 25548335 25550215 Gma03g01608 03 42290109 42291626 PCT