Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01138 ATGGCGAGGATAAAGGTGTACGAGTTGAGGAATAAGACGAAGGCGGAGCTACTGAACCAGCTCAAGGATCTCAAGGCGGAGCTAGCCCTGCTCCGCGTCGCCAAGGTTACCGGCGGCGCCCCAAACAAGCTCTCCAAAATTAAGGTGGTGAGGCTATCGATAGCGCAGGTTTTGACGGTTATTTCCCAGAAGCAGAAAGCGGCGCTGAGAGAGGCTTACAAGAAGAAGAAGTATTTGCCCCTTGACCTCCGTCCCAAGAAGACCCGCGCCATTCGCAGACGCCTTACCAAACACCAGGTGTCTTTGAAGACGGAACGTGAGAAGAAGAAGGAGCTGTACTTTCCACTAAGAAACATTCCAATTATTAGTACCAGAGTTGTTTCAATGCTTGCATTAAGTTTCCAAGTTGAAGCTGTCCTACAGCTTCCAAAAAACCACTTTGCAAGCCCTATTTTCCAGTTGAGCTCATCTGAGTTGATGGAGTTGAACGCTTTTGAGTTGAAGCTTCGATTGTTACTGCAGTTTTGTTGGTTGGATTTGCAGCTGCACTCATCTGAGTTAAAGGAGTATTTTGTTTTCCTTTTGTGGCCTAAGGCCAAGATGTTTTTACATTAG 615 0.4699 MARIKVYELRNKTKAELLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQVSLKTEREKKKELYFPLRNIPIISTRVVSMLALSFQVEAVLQLPKNHFASPIFQLSSSELMELNAFELKLRLLLQFCWLDLQLHSSELKEYFVFLLWPKAKMFLH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01138 204 Hamap 50S ribosomal protein L29 [rpmC]. 4 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gma13g01138 204 Gene3D - 78 119 - -
Gma13g01138 204 TIGRFAM L29: ribosomal protein uL29 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gma13g01138 204 Pfam Ribosomal L29 protein 8 64 IPR001854 GO:0003735|GO:0005840|GO:0006412
Gma13g01138 204 PANTHER 60S RIBOSOMAL PROTEIN L35-LIKE 1 120 - -
Gma13g01138 204 Gene3D - 1 77 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gma13g01138 204 PANTHER 60S RIBOSOMAL PROTEIN L35 1 120 IPR045059 GO:0000463|GO:0022625
Gma13g01138 204 SUPERFAMILY Ribosomal protein L29 (L29p) 4 65 IPR036049 GO:0003735|GO:0005840|GO:0006412
Gma13g01138 204 CDD Ribosomal_L29_HIP 8 64 - -
Gma13g01138 204 Coils Coil 7 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01138 Gma-Chr13 25530391 25535167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01138 1 121 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 85.124 6.71e-67 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01138 K02918 - gmx:100306624 223.016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00430 10 4130308 4132027 Gma13g01138 13 25530391 25535167 GST