Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01129 ATGACATGCAACCTCAAATTTTCTTCATTTCAGGCCCTCGGTGGCCACAGGGCCAGCCACAAAAAGCCCAAACTATACGTGAAAGAACAGTGTAAAATTCTGATGTTGAGGAATAAGCCCAAAAAACACGAGTGCTCCATTTGTGGTAGGGAATTCACTTTGGGCCAGGCACTGGGTGGACACATGAAAAAGCACAGAATTGCCGTTGACCAAGGGCTTTCTTCAATAAACAAGGTTGTTGTAAAAGTACCGGTTCTTAAAAGGTCGAATAGTAAGAGGGTTTTGTGCTTGGACTTGAACTTGACTCCTCTGCAGAATGACTTGAAGTTATTGTTTGGAGACAAGGCACCCAAAGTTGATTCCTTCGTCTGA 372 0.4382 MTCNLKFSSFQALGGHRASHKKPKLYVKEQCKILMLRNKPKKHECSICGREFTLGQALGGHMKKHRIAVDQGLSSINKVVVKVPVLKRSNSKRVLCLDLNLTPLQNDLKLLFGDKAPKVDSFV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01129 123 PANTHER ZINC FINGER PROTEIN ZAT5 2 118 - -
Gma13g01129 123 ProSiteProfiles Zinc finger C2H2 type domain profile. 43 65 IPR013087 -
Gma13g01129 123 Pfam C2H2-type zinc finger 2 23 - -
Gma13g01129 123 Pfam C2H2-type zinc finger 43 67 - -
Gma13g01129 123 Gene3D Classic Zinc Finger 1 65 - -
Gma13g01129 123 SUPERFAMILY beta-beta-alpha zinc fingers 40 66 IPR036236 -
Gma13g01129 123 ProSitePatterns Zinc finger C2H2 type domain signature. 45 65 IPR013087 -
Gma13g01129 123 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 2 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01129 Gma-Chr13 25444079 25444450 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01129 2 120 C2H2 Transcription Factor Family AT2G37430 57.258 8.06e-40 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma13g01129 zf-C2H2_6 2.5e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01129 - - gmx:100793243 251.521