Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01127 ATGTCTTTCCACAATCAAGCATTTTGGATGGGGAAGAGTCCTGGGGGGTTGAATGACGGTGACATGACAAATGACAATTCTTCTAGAATAGAGTCCAAGCGTGCTCATCAGTGGTTCATGGATGACCCTGAAGTGGATATGTTTCCCAATAAGAAACAAGCCGTAGAGGCTCCAAACAATTTGTTATCTGGAATGCTCAACTCCAATATTTCTTCATGGGGAAATTCCTCAGGATTTCACTCTTTAAATGGTCATTTTACTGAACAGTTATTTGCCCCAGATGCAGTAACTATGGGTTTTGAAGACACAAACACCCCCTCTGTTAGCATAGATGATAAGTTGAGTGTGGAAAGAAAGGATAACATGGATCCCTTTGGGAGTGAGTCCTCATTTGGTTTATCCATCTCAACTGCATTAGAAGATCCTCATTTAGTTTTTAATTATGATGGAACTAGAAAAGTCAAAGTTAATGAGGTGAGGGAATCTGAGAATGCCATGCCTGTTGCTACAAATAATCCCTATGAAAGAGGTGTTAGTGACAGTGTCTCAAATCCTTGTCTATACAAGGAGGATGATAATTCCATATCAACAAGTCTCGCCTACAATGAAGAGGTTGCGAATATAATAACAATGGATGGCACATATGACAGGACAGATAACAATTTTACATCAATTATTCAATCCTATAACAAGGGAAATGACAGCTTATCTATACATCCAACGTTCAATGAAATGGATTTGGGTTTCAGTAAGGTAGATAGTAATGTAACATCTATTGCTCAAGGTTACAACAAGGCCTATAACAATTCCGTGTTAACTAACCACTTATACAGTAAGGTTGACAATGACACTTTATCATTGCATCACACCTACCACAAGCAGGGAAATGATGTGCCATTTGTTTCACATTCCTATAATAATGGAGAGAGCACTATCATATCCTTTGGTGGCTGTGATGATGATGCAACTCCCACTCACTTATTCATTTCTGACTATGAGAGCATCTATCATTTACTTCCAAGTACAGCTCAGACATCTGAACCTGAGACTGAAAATGTTCCCAAGACAAAAGGGGAGATAAAAATGTGTAGAAAAGCTACTTCAAACAACTTCCCTTCAAACGTCAGAAGTTTGCTATCCACTGGTATGCTGGATGGTCTCTCAGTAAAGTACAAGGCGTGGTCACGGGAGAAGGAACTTCGAGGTGTTATAAAAGGTGCTGGCTATTTGTGCAGTTGTCACTCATGTAATTTTTCCAAGGTTATTAATGCATTTGAATTTGAGCGACATGCTGGTTGCAAGACAAAACACCCCAATAATCACATTTACTTTGATAATGGGAAAACTATATATGGGGTTGTACAAGAGCTCAGGAGCACTCCACAGAGCATGTTGTTTGAAGTTATTCAGACTATAACTGGTTCACCTATCGATCAGAAATCCTTCTGCATTTGGAAAGAATCTTTTTTGCCTACAGCAGGGAACTCCAGCGCATATGGGCAAAACAAGAAGTAA 1515 0.3934 MSFHNQAFWMGKSPGGLNDGDMTNDNSSRIESKRAHQWFMDDPEVDMFPNKKQAVEAPNNLLSGMLNSNISSWGNSSGFHSLNGHFTEQLFAPDAVTMGFEDTNTPSVSIDDKLSVERKDNMDPFGSESSFGLSISTALEDPHLVFNYDGTRKVKVNEVRESENAMPVATNNPYERGVSDSVSNPCLYKEDDNSISTSLAYNEEVANIITMDGTYDRTDNNFTSIIQSYNKGNDSLSIHPTFNEMDLGFSKVDSNVTSIAQGYNKAYNNSVLTNHLYSKVDNDTLSLHHTYHKQGNDVPFVSHSYNNGESTIISFGGCDDDATPTHLFISDYESIYHLLPSTAQTSEPETENVPKTKGEIKMCRKATSNNFPSNVRSLLSTGMLDGLSVKYKAWSREKELRGVIKGAGYLCSCHSCNFSKVINAFEFERHAGCKTKHPNNHIYFDNGKTIYGVVQELRSTPQSMLFEVIQTITGSPIDQKSFCIWKESFLPTAGNSSAYGQNKK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01127 504 PANTHER PROTEIN, PUTATIVE-RELATED 5 503 - -
Gma13g01127 504 PANTHER AUTOIMMUNE REGULATOR 5 503 - -
Gma13g01127 504 Pfam Tify domain binding domain 402 457 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01127 Gma-Chr13 25411815 25414939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01127 352 489 PHD Transcription Factor Family AT3G53680 53.623 6.68e-43 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01127 - - gmx:100792190 1033.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00420 10 4034829 4037711 Gma13g01127 13 25411815 25414939 GST