Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01111 ATGGCTGATTCCACTCCGACTGCAACTCCTTCAAACGACATCGTATCAAGCTCTTTCCGACGAACGGTCACCTTATACGATTGGTGGTTGGTTATAGCCAAAAACGACTTCCAAGGAAAGCGTTTAGCCGTCGCTGGCGTCTCGTCGAGAAAGGATGAGGCAACGCGTGTGTTTGTTTCTGCTGCTGTTATCAAAAGATATGACGTGTTTTCTCTCGAGACTGCGGATGGGATATGCGTCATAATCAGGGGCTTCATCAACGAGCAGCGCACTCTCGAAAATGGTTTTTCCGCCGAGGTTTTCCACCATTTTTTATTTGGCTTTCCTCCAGACTGGGAAAGGTATGCTCTAGATTGCTTCAAAGAAGAACCTACCACTGATGCTGATTTGGGTAGTGTTGTTCCTGATAATGCACCAGCTAGCTGTCCAAAAATTTTATCTGATGGTGTGGAAAAATCTATTCCTACCTGTTTGGTATCACCAGAGGAGGCCTCAGGAGATCACGAAATGTCATTCCCCGAAAATGAATGCAACGTGTCAAAGGAGATGGGTGGGGTTCATGTTGCTTGTAGTAGTGGTGGGAAAAGCCATAGTTTCAAGTTGCACAATATTAAAGTATGCCAGCAGAAGAAGCAGCCTGCTTCTGAATGTCTTCCGAACCATCCAGATAATGAGAACTCTAGTTCAGTGGCCTTGGAGAATTGTAATGTAGAGAGACTGGAAAGTCCGACAACACCCATTCAGCCGCAATTGTGGAGTGAATATTCAAACGATGCTTGTGTGGAAAATGCTATTCCTACTTCTTTGGCATCAGAGGAGGCCCCGGGAGATCATGAGAAGTCATTCCCTGAAAATGAATCCAACGTGTCAAAGGAAATTAATGGGGTTAATGTTGCTTGTAGTAGTGGTGGGAAAAGTCGTAGTGCCAGGTTGCATGATATTAAAGTATACCAGCAGAAGAAGCCTGCTTCTGGAGGGTCTCTGAAGCATCCAAATAATGAGAACTCTACTTCAGTGGCCTTGGAGAATTGTGATGTAAAGGGACTGAAAAGTCCAGCAACACCCATTCAGTCACAATCGTCAAGACAACTAAGCACATCACCTGGGCAGGTAATTAAAAAATCTGCATCCAAAATTTCTAGAACATTGTCACCAAAGACTGAAGGCTGTTATAAGAAAAAGAGAGTGACAGTTGAAACAAAAGTGGTCATGCCCAAGGGAAAACTGAATAAATCTGCATCTGCTTTGAAAAATCCACGAGAAAAGGATCTAAGCCCCTTGGCCAAGGGAAGCCAACAGAAAATATCCACATTTACTCCAGAGTCACTAAGTTTCAGAAAATCCAGATCCGGTAGGTTGCTTCTACCTCCCTTAGAGTTTTGGCGCAATCAAATACCAATTTATAATGCGGACCACGAGATTACAGAAATTCGGGATGGTGCATCTCTGATATCACCTTGTAGAGGTTTTTCACCATCATTGAGTAGGTTTAGCAATCAAAAACGTGGAGCGTGA 1515 0.4389 MADSTPTATPSNDIVSSSFRRTVTLYDWWLVIAKNDFQGKRLAVAGVSSRKDEATRVFVSAAVIKRYDVFSLETADGICVIIRGFINEQRTLENGFSAEVFHHFLFGFPPDWERYALDCFKEEPTTDADLGSVVPDNAPASCPKILSDGVEKSIPTCLVSPEEASGDHEMSFPENECNVSKEMGGVHVACSSGGKSHSFKLHNIKVCQQKKQPASECLPNHPDNENSSSVALENCNVERLESPTTPIQPQLWSEYSNDACVENAIPTSLASEEAPGDHEKSFPENESNVSKEINGVNVACSSGGKSRSARLHDIKVYQQKKPASGGSLKHPNNENSTSVALENCDVKGLKSPATPIQSQSSRQLSTSPGQVIKKSASKISRTLSPKTEGCYKKKRVTVETKVVMPKGKLNKSASALKNPREKDLSPLAKGSQQKISTFTPESLSFRKSRSGRLLLPPLEFWRNQIPIYNADHEITEIRDGASLISPCRGFSPSLSRFSNQKRGA 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01111 504 PANTHER MIS18-BINDING PROTEIN 1 12 496 IPR039110 -
Gma13g01111 504 MobiDBLite consensus disorder prediction 352 376 - -
Gma13g01111 504 MobiDBLite consensus disorder prediction 350 376 - -
Gma13g01111 504 MobiDBLite consensus disorder prediction 411 433 - -
Gma13g01111 504 MobiDBLite consensus disorder prediction 271 290 - -
Gma13g01111 504 Pfam SANTA (SANT Associated) 23 115 IPR015216 -
Gma13g01111 504 PANTHER MIS18-BINDING PROTEIN 1 12 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01111 Gma-Chr13 25287715 25292605 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gma13g01111 SANTA 1.1e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01111 - - gmx:100790080 1006.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00407 10 3931889 3939348 Gma13g01111 13 25287715 25292605 GST