Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01100 ATGCAGATGCTCATAGACAAAGAGATGTCCAAAAAAAAAGACTCCAAGCACACCCTACCAAATGTAGTAGCAAAACTAATGGGGCTTGAGGCCCTTCCAAGGGGAGAGCCTCATTTATCTATGGAAAGAAGCCACAGAAGAGACTATTCTCAACAAATGTATGGTCCTGTAGGCTTACCATTCAAGCATTGGCAACAGGAAGATAGGTTTATGGATAGGGAAATGCTTCATGAAGTTCATCCAAGCACAGAACAGGTTGCTTACAAAGATATGTATGAAATATGGCAGCAATCTCAGAGAGCAAGCCATGACAGAGGAAAGTGGAGTGAAGATGTTGATGAGAAAAGAATGGCTCTGATTCGACAGAAATTCATGGAAGCAAAACGTCTGTCAACCGATGAGAGACTGCACCAATCTGAACAATTTAAAGATGCCTTGGAAGTTTTAAGCTCCAATAGTGATCTCTTGATCAGGTTATTGGATTCTCAAAATGTTTCTGATTTATACTCAACTTCACCTAATGAGACAAAGCGCATTACTCTTATTAAACCTTTGAAGATGGTTGACAACGACAAATCTGCCAGAAAGGAGAAAACGAATAATAGACCGATTAAGAAACCATCTAGTGTTGATCAAGCAAATCCTGGAAACTCTCCAGATAGTCAGAAAGTTGATGAATCTCCGGTCCGAACCACTCGAATAGTGTTACTAAAGCCAAGCCCAGGGAGGACACCTGAGCAAAAGGCTGTTGTTTCTCCAACAACTTCGCTGAATCTGAAAAGCAGAAATTTCCATCATGGACCTGAATATGATGATGTACTAGAATCCATTAGAGTGGCAAATGAGATCACACAGCAAATGCATAAAGGCCCGAGGAGCTATCAAAAGGATAAAACTCTGTATTCCTCAGTGTTTTCCAATGGCTATTCTGATGATGAGAGTTCATTCAACAAATCATATCATGAGTATGCATCTGCGAATTTCAGTGATTTTGAAGCTACGTCAATGTCACCATTGCCAAGGCTTTCGTGGGATTACAATTACATCAATGGCTATGGCAGCCCTTATTCTACAATGTCCTTGGGCCGTGTGCCATGCTCTCCCGAGTCATCGGTGTGCAGAGAGGCAAAGAAAAGACTTTCTGAAAGATGGACTATGATGACATCAGATAATAAGGGTCATCAAGAACAAAGGCAAGCAAGGAAAAGCTCTACCTTGGGTGAGATGCTTTCTCTTACCCACAAAAAGAAATCTGTAACATCTGAGGTTGAGAGTATCAATGAGGACCAAGAACCTGGCAAATCTGTTTCTTGTAGTCATTCTTTCAATGCAGAAATAAGCATTGAGGGTTCTCCTAAAAATCTCCCCAGGTCAAATTCTGTGCCTGCATCTTCTACTGTATATGAAAATGGCCTCACAGTTAAAGTAAATGATCATAAGAATACTGGCAAAGCACAAGGCTCCAAGGAGCAGAAAAAGCCTAAGAGTATGAGATCATCTTTTAAAGGGAAAGTTGCTACTTTCTTGTTCTCAAGGAGTAAGAAATCAACCAAGGAAAAACCAAGTTCATCTCAATCTAAAGATGCATCCCAATCTACTTCCACTGTCACTGCAACATTAGTTCTTCCAGCAAATTCACCTGGAGTCCTTAGGGGTGATGTGTCTCAAAGCATCAATGTGGATGGTTTTGAAGAGTGTTCTCTTGCAGCGCTATGTGAATCATCAGGGAAAAATTCAACAGATTCAGTCTCTAACGGACATGAAGAAGACATGATTACACTAGAGCCTGGATTGACTATGCCAAGGCCCATGGTGCCAGAGATTCATTCAAGCGAAAACCCAGATCAGCCAAGTCCAATCTCAGTGTTACAACCTCCATTTGAAGATTATAATAATAATAATGCATCACATGAGTCCTTGAACTGTATGAAGAGTGGTGACCAGGGGTCACAGGTGCCACTGAAGTCCAATTTAATTGACAAATCACCACCTATAGAATCAATAGCTAGGACCCTATCATGGGATGGTTCTAGTGCAGAAGTGGCAAGTTCCTATGCATTAAAACCCTTAATGGTTTCTTCCTTGGACTCCAAGGTAGAGGATCAAGAGTGGCTTCTCTTGGTCCACAAACTACTATCAGCAGCTGGACTTGATGATCAACACCAACATGACTCATCTTACACTAGATGGCATTCCCTTGAGAGCCCATTGGACCCATCACTGAGGGACGCATTATACGCCAATCTAAATGAGAAGGAGCCTCAGCCAATTATGCATGAGCGCAGAAGAAGGAAGATGAGATCAAACCACAAACTTGTGTTTGACTATGTCAATGCTGCACTATTGGAACTTGTTGGTTATGGGTCAGAAAAGTGCTTAAAGAGAAGTAAGAGCCACTACAGGGTCCAAGTCCAAGAGGGTGCATCAGCAGCAGCATCTCCCTTATTGGTGGACCACATTGTGGCCCAAATGAAGGAATTAATAGCAAGTGGGGTGAGGTGTGAGTGGGAAAATGGTGGGGCCAGCACCAGCCTGGTGGTAGAAAATGTTGTCAGAAAAGAGGTTGTGCAAATAGGGTGGGTTGAGCTTATGGAATTGGAGATTGATATTTTGGGGAAGGAGATTGAAGGGGACTTGATTCAAGAGCTTGTGGAGAATGCAGTGGTTGATTTGACAGGCAGGGCCTCTGAGTCCCTCTCTTGA 2703 0.4243 MQMLIDKEMSKKKDSKHTLPNVVAKLMGLEALPRGEPHLSMERSHRRDYSQQMYGPVGLPFKHWQQEDRFMDREMLHEVHPSTEQVAYKDMYEIWQQSQRASHDRGKWSEDVDEKRMALIRQKFMEAKRLSTDERLHQSEQFKDALEVLSSNSDLLIRLLDSQNVSDLYSTSPNETKRITLIKPLKMVDNDKSARKEKTNNRPIKKPSSVDQANPGNSPDSQKVDESPVRTTRIVLLKPSPGRTPEQKAVVSPTTSLNLKSRNFHHGPEYDDVLESIRVANEITQQMHKGPRSYQKDKTLYSSVFSNGYSDDESSFNKSYHEYASANFSDFEATSMSPLPRLSWDYNYINGYGSPYSTMSLGRVPCSPESSVCREAKKRLSERWTMMTSDNKGHQEQRQARKSSTLGEMLSLTHKKKSVTSEVESINEDQEPGKSVSCSHSFNAEISIEGSPKNLPRSNSVPASSTVYENGLTVKVNDHKNTGKAQGSKEQKKPKSMRSSFKGKVATFLFSRSKKSTKEKPSSSQSKDASQSTSTVTATLVLPANSPGVLRGDVSQSINVDGFEECSLAALCESSGKNSTDSVSNGHEEDMITLEPGLTMPRPMVPEIHSSENPDQPSPISVLQPPFEDYNNNNASHESLNCMKSGDQGSQVPLKSNLIDKSPPIESIARTLSWDGSSAEVASSYALKPLMVSSLDSKVEDQEWLLLVHKLLSAAGLDDQHQHDSSYTRWHSLESPLDPSLRDALYANLNEKEPQPIMHERRRRKMRSNHKLVFDYVNAALLELVGYGSEKCLKRSKSHYRVQVQEGASAAASPLLVDHIVAQMKELIASGVRCEWENGGASTSLVVENVVRKEVVQIGWVELMELEIDILGKEIEGDLIQELVENAVVDLTGRASESLS 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01100 900 MobiDBLite consensus disorder prediction 190 229 - -
Gma13g01100 900 MobiDBLite consensus disorder prediction 512 534 - -
Gma13g01100 900 MobiDBLite consensus disorder prediction 190 204 - -
Gma13g01100 900 MobiDBLite consensus disorder prediction 415 429 - -
Gma13g01100 900 Pfam Protein of unknown function (DUF3741) 121 164 IPR022212 -
Gma13g01100 900 MobiDBLite consensus disorder prediction 205 225 - -
Gma13g01100 900 MobiDBLite consensus disorder prediction 430 481 - -
Gma13g01100 900 Pfam DUF761-associated sequence motif 20 33 IPR032795 -
Gma13g01100 900 Pfam Domain of unknown function (DUF4378) 708 885 IPR025486 -
Gma13g01100 900 MobiDBLite consensus disorder prediction 388 500 - -
Gma13g01100 900 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 895 - -
Gma13g01100 900 MobiDBLite consensus disorder prediction 482 497 - -
Gma13g01100 900 PANTHER DUF3741 FAMILY PROTEIN 1 895 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01100 Gma-Chr13 25157676 25161326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01100 1 892 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 38.420 2.14e-143 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01100 - - gmx:100787955 1769.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00395 10 3794741 3798725 Gma13g01100 13 25157676 25161326 GST
Gma19g01618 19 45615000 45619299 Gma13g01100 13 25157676 25161326 PCT
Gma03g01564 03 41925720 41930366 Gma13g01100 13 25157676 25161326 PCT
Gma13g01100 13 25157676 25161326 Gma19g01618 19 45615000 45619299 PCT
Gma13g01100 13 25157676 25161326 Gma03g01564 03 41925720 41930366 PCT