Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01093 ATGGCTGCCACCGCCAATCCTATAATTGGTTCCCATGTTTGGGTGGAGGATTCTCAAGTAGCTTGGATAGATGGTGAGGTCTTGGAGGTTAAGGGAGAAGAAATCAAAGTTCTTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGCTTCTAGTGTTTATCATAAAGATACCGAAGCCCCCCCATGTGGAGTGGATGATATGACAAAACTTGCTTATCTACATGAACCTGGTGTCCTGGATAATCTGAGATCAAGATATGATATCAACGAAATTTATACTTACACCGGGAATATATTGATTGCTGTGAATCCTTTCATAAGGCTTCCTCATTTATACGATAGCCATATGATGGCACAATATAAAGGAGCAGGTTTTGGTGAGCTAAGCCCACATCCTTTTGCTGTTGCAGATGCAGCATATAGACTTATGATTAATGAGGGAATCAGCCAGTCAATATTGGTTAGTGGTGAAAGTGGGGCTGGGAAAACGGAAAGCACCAAGTTACTCATGCGCTATCTTGCTTACATGGGAGGGAGAGCTAATAATGCTTCTGAAGGTAGATCTGTTGAGCAGAAAGTCCTGGAGTCCAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGAAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGACCAGAGGGGAAGGATTTCTGGGGCTGctatcagaacttatctgctggaaagatcacgtgtttgccagttgtcagatccagagaggaactatcactgtttctatatgctctgtgctgcacctccggagGATATTCAGAAGTACAAATTAGGAAATCCTAGAGCATTTCATTATCTGAATCAAACAAATTGCTTTGAGTTGGAAGGGGTTGATGAGTTAAAAGAATATCAGGATACGAGGAGAGCAATGGACGTTGTTGGAATAAGTTCTGAGGAACAGGAAGCAATATTTCGAGTGGTTGCTGCAATTTTGCATCTTGGCAACATTGAATTTACAAAAGGGCAAGAAATTGACTCATCTGTGCCCAAAGATGAAAAATCTTGGTTTCATCTACGAACTGCTGCTGAACTTTTCATGTGTAATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACTATAACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATTGTGTACACGAGGTTGTTTGATTGGCTGGTGGATAAAATAAATAATTCAATTGGTCAAGACCCTGACTCAAAGTCCTTAATTGGTGTGCTGGATATTTATGGTTTTGAGAGTTTCAAGACTAACAGTTTTGAGCAATTTTGTATCAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAAGAAGAATACAAAAAAGAAGAGATTGATTGGAGTTACATTGAGTTTGTTGATAATAAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTCTTGATGAAGCTTGTATGTTTCCTAGATCAACACATGAAACTTTTGCCCAAAAGCTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAACCCAAGTTGGCACGTAGTGACTTCACAATTTGCCATTATGCGGGTGATGTCACGTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACACCAGGAACTTCTTTATGCTTCCAAATGCCCCTTTGTGTCTGGTTTGTTCCCCCCTTCACCTGAGGAATCGTCCAAACAATCGAAGTTCTCTTCAATAGGTTCCCGGTTTAAGCAACAATTGCAAGCACTACTTGAAACTCTCAGTGCCACTGAGCCACACTACATTCGCTGTGTGAAACCCAATAATCTTCTTAAGCCAGCAATTTTTGAGAATAAAAATGTTTTACAGCAACTGCGATGTGGGGGAGTTATGGAGGCAATTAGGATAAGCTGTGCCGGGTATCCTACTAGGAAGACTTTTGATGAATTTGCAGACCGATTTGGACTTCTTGCACCTGAAGCTTTGGACGGGAGTTCTGATGAGGTCACTGCTTGCAAAAGGATTCTGGAGAAGGTTGGACTTAAGGGCTATCAGATTGGTAAAACAAAAGTGTTTCTTCGAGCTGGTCAAATGGCAGATCTAGATACTCGTAGAAGTGAGGTCTTAGGAAAGTCAGCAAGCATTATTCAGAGAAAAGTTCGTACCTATTTGGCCCGCCGTAGTTTTGTCTTGATACATTTGTCTGCTATACAGATTCAAGCTGCATGCAGAGGTCAACTTGCTCGGCAAGTTTACGAGGGATTGCAGCGGGAGGCTTCTAGTGTGAAGATTCAAAGGTATTTACGCATGCATGTTGCTAGGAAGGCATATAAAGAATTGTGTAGCTCGGCTGTTTCTATTCAGACTGGTATGCGAGGGATGGCTGCTCGTACTGAGCTACGCTTCAGGAAGCAAACTCGTGCTGCTATTGTCATTCAGAGCCACTGCCGGAAATACCTGGCTCAACATCATTTTACAAACTTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTACGACAGCTCAAGATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTTGAAAAACAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGCCTGAGGATTGACATTGAAGAATCAAAAACACAAGAAAATGAAAAACTACAATCTGCTTTGCAAGCGATGCAACTTCAGTTTAAAGAAACTAAGTTGTTACTTAAAAAGGAGCGTGAGGCTGCAAAAAGAGAAGCTGAGAGAGCGCCTTTCATACAGGAGGTTCCTGTTGTTGACCATGCTTTGTTGGAGAAGCTCACTAGTGAAAATGAGAAACTCAAGACTTTGGTGAGTTCATTGGAAAAGAAAATTGATGAAACAGAAAAAAGATACGAAGAGGCAAACAAAGTTAGTGAAGAAAGGTTGAAGCAGGCTTTGGATGCCGAATCAAAAATAATCCAGTTGAAGACTGCTATGCAAAGACTCGAAGAGAAATTCTCAGATATGGAAACCGAAAACCAGGTTCTTCGGCAACAGTCTCTGCTAGACTCATCTGCAAAAACAGTGTCAGAACACCTTTCTACCCACATATCTGAGAAGTTGGAAAATGGTCACCATGTGGTGGAAGATCAGAAAACTTCTGAAGCACAGAATGTCACACCTGTGAAGAAGTTTGGTACAGAATCTGATGGCAAATTGAAGAGATCCTTCATTGAACGTCAACATGAGAATGTTGATGCACTTGTCAACTGTGTTATGAAAAATATTGGTTTCCATCATGGAAAGCCTGTTGCTGCATTTACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAGGCTGAAAGAACAAGTGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGAATCAAGATGACAATGATCTTATGGCCTATTGGCTGTCAAATTTGTCTGCACTATTGTTTTTGCTCCAGCAAAGTCTAAAATCCGGTGGTGCAGCTGATGCCACTCCTGTAAAAAAACCACCAAATCCGACATCCCTCTTTGGAAGAATGACTATGGGTTTTCGTTCATCTCCTTCTTCTGCCAACCTTCCTACCCCACCATTGGACGTTGTACGCAAAGTAGAAGCTAAATATCCTGCTTTGCTTTTCAAGCAACAGCTCACAGCCTATGTGGAGAAAATATACGGTATCCTTCGGGACAACTTGAAGAAAGAATTGGCATCAATGCTTTCGTTATGTATACAGGCACCAAGAACATCCAAGGGAGTGCTACGATCTGGCCGATCCTTTGGTAAAGATTCTCCCATGGGTCACTGGCAGAGTATTATAGAATCCCTGAACACTCTCCTCTGTACTCTGAAAGAAAACTTTGTACCTCCAGTTCTTATCCAAAAGATCTTCACTCAAACATTCTCATATATTAATGTTCAACTCTTCAATAGTCTTCTTCTGCGTCGTGATTGCTGCACATTCAGCAATGGGGAATATGTGAAAGCTGGTTTAGCAGAATTGGAGTTGTGGTGCTGCCAAGCAAAGGAGGAGTATGCAGGTTCATCTTGGGATGAGCTTAAGCATATAAGACAAGCTGTTGGATTCTTGGTTATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCAATCATGAGTGTCCAGCAGCTATACAGAATATGTACACTTTACTGGGATGCTAACTACAATACTCGAAGTGTATCTCCAGATGTCCTTTCAAGCATGAGAGTACTTATGGCTGAGGACTCTAATAATGCTCAGAGTGATTCTTTCTTGTTGGATGACAGTTCCAGCATCCCCTTCTCAGTGGATGACTTCTCTACATCACTGCAAGAGAAGGATTTCTCTGACATGAAACCAGCGGATGAGCTGCTTGAGAATCCCGCCTTCCGATTTTTAAATGAGTTGGCAAGGGAAGCTTAG 4560 0.4033 MAATANPIIGSHVWVEDSQVAWIDGEVLEVKGEEIKVLCTSGKTVVVKASSVYHKDTEAPPCGVDDMTKLAYLHEPGVLDNLRSRYDINEIYTYTGNILIAVNPFIRLPHLYDSHMMAQYKGAGFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRANNASEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPPEDIQKYKLGNPRAFHYLNQTNCFELEGVDELKEYQDTRRAMDVVGISSEEQEAIFRVVAAILHLGNIEFTKGQEIDSSVPKDEKSWFHLRTAAELFMCNAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYTRLFDWLVDKINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNKDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLARSDFTICHYAGDVTYQTELFLDKNKDYVVAEHQELLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQALLETLSATEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEALDGSSDEVTACKRILEKVGLKGYQIGKTKVFLRAGQMADLDTRRSEVLGKSASIIQRKVRTYLARRSFVLIHLSAIQIQAACRGQLARQVYEGLQREASSVKIQRYLRMHVARKAYKELCSSAVSIQTGMRGMAARTELRFRKQTRAAIVIQSHCRKYLAQHHFTNLKKAAIATQCAWRGKVARRELRQLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRIDIEESKTQENEKLQSALQAMQLQFKETKLLLKKEREAAKREAERAPFIQEVPVVDHALLEKLTSENEKLKTLVSSLEKKIDETEKRYEEANKVSEERLKQALDAESKIIQLKTAMQRLEEKFSDMETENQVLRQQSLLDSSAKTVSEHLSTHISEKLENGHHVVEDQKTSEAQNVTPVKKFGTESDGKLKRSFIERQHENVDALVNCVMKNIGFHHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLSNLSALLFLLQQSLKSGGAADATPVKKPPNPTSLFGRMTMGFRSSPSSANLPTPPLDVVRKVEAKYPALLFKQQLTAYVEKIYGILRDNLKKELASMLSLCIQAPRTSKGVLRSGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKIFTQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPIMSVQQLYRICTLYWDANYNTRSVSPDVLSSMRVLMAEDSNNAQSDSFLLDDSSSIPFSVDDFSTSLQEKDFSDMKPADELLENPAFRFLNELAREA 1519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01093 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 885 IPR027417 -
Gma13g01093 1519 ProSiteProfiles IQ motif profile. 856 885 IPR000048 GO:0005515
Gma13g01093 1519 Coils Coil 918 938 - -
Gma13g01093 1519 Gene3D - 441 625 - -
Gma13g01093 1519 PANTHER MYOSIN-14 7 1512 - -
Gma13g01093 1519 Pfam IQ calmodulin-binding motif 739 757 IPR000048 GO:0005515
Gma13g01093 1519 Pfam IQ calmodulin-binding motif 834 853 IPR000048 GO:0005515
Gma13g01093 1519 Pfam IQ calmodulin-binding motif 763 780 IPR000048 GO:0005515
Gma13g01093 1519 Pfam IQ calmodulin-binding motif 788 806 IPR000048 GO:0005515
Gma13g01093 1519 Pfam IQ calmodulin-binding motif 858 877 IPR000048 GO:0005515
Gma13g01093 1519 Gene3D - 254 312 - -
Gma13g01093 1519 Gene3D - 835 884 - -
Gma13g01093 1519 Gene3D - 736 786 - -
Gma13g01093 1519 Gene3D - 787 834 - -
Gma13g01093 1519 ProSiteProfiles Dilute domain profile. 1159 1460 IPR002710 -
Gma13g01093 1519 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 ProSiteProfiles IQ motif profile. 760 789 IPR000048 GO:0005515
Gma13g01093 1519 SMART MYSc_2a 57 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 Gene3D Myosin VI head, motor domain, U50 subdomain 314 603 - -
Gma13g01093 1519 Gene3D Kinesin motor domain 65 664 IPR036961 -
Gma13g01093 1519 ProSiteProfiles Myosin motor domain profile. 62 734 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 ProSiteProfiles IQ motif profile. 810 837 IPR000048 GO:0005515
Gma13g01093 1519 Coils Coil 974 1050 - -
Gma13g01093 1519 Gene3D - 668 735 - -
Gma13g01093 1519 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 PRINTS Myosin heavy chain signature 198 225 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 PRINTS Myosin heavy chain signature 431 459 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 PRINTS Myosin heavy chain signature 484 512 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 ProSiteProfiles IQ motif profile. 785 814 IPR000048 GO:0005515
Gma13g01093 1519 Pfam Myosin head (motor domain) 64 722 IPR001609 GO:0003774|GO:0005524|GO:0016459
Gma13g01093 1519 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 787 IPR027417 -
Gma13g01093 1519 SMART DIL_2 1335 1442 IPR002710 -
Gma13g01093 1519 Pfam DIL domain 1336 1439 IPR002710 -
Gma13g01093 1519 SMART iq_5 855 877 IPR000048 GO:0005515
Gma13g01093 1519 SMART iq_5 807 829 IPR000048 GO:0005515
Gma13g01093 1519 SMART iq_5 759 781 IPR000048 GO:0005515
Gma13g01093 1519 SMART iq_5 832 854 IPR000048 GO:0005515
Gma13g01093 1519 SMART iq_5 736 758 IPR000048 GO:0005515
Gma13g01093 1519 SMART iq_5 784 806 IPR000048 GO:0005515
Gma13g01093 1519 CDD MyosinXI_CBD 1110 1483 IPR037975 GO:0007015
Gma13g01093 1519 ProSiteProfiles IQ motif profile. 833 862 IPR000048 GO:0005515
Gma13g01093 1519 PANTHER MYOSIN 7 1512 - -
Gma13g01093 1519 Coils Coil 879 913 - -
Gma13g01093 1519 CDD MYSc_Myo11 76 722 IPR036018 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01093 Gma-Chr13 25058578 25077334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01093 1 1513 Myosins gene family AT5G43900 75.560 0.0 2368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01093 K10357 - gmx:100786893 2945.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00392 10 3716854 3734730 Gma13g01093 13 25058578 25077334 GST
Gma19g01616 19 45540208 45554902 Gma13g01093 13 25058578 25077334 PCT
Gma03g01562 03 41850800 41868076 Gma13g01093 13 25058578 25077334 PCT
Gma03g02291 03 48135720 48146406 Gma13g01093 13 25058578 25077334 PCT
Gma13g01093 13 25058578 25077334 Gma19g01616 19 45540208 45554902 PCT
Gma13g01093 13 25058578 25077334 Gma03g01562 03 41850800 41868076 PCT