Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01092 ATGGATGAGAAAGCCAAGAAAAAGGGGAGAAAAGATGAAGTAATGAATATTAATGTTGCTGATGATAAAGAAGTGCAGTTCTTGGATGACAACCAAGAAAGCAAGATGAAGAAAAGAAAAAAAGATGATTCTTCATTAAATGGAATCCAAGAATTGGTTTTTTCAAAACCAAGCAAGAAAATGATGAAGGATAATAGGTTAAAAAGCAACAAAGGTAAAGATGATGACCAAGGCAAGCTGATGATGAAGAAGAAATTGAGTGCAGAAAACCAACATGTGGATCACAATGAATTTAAAAGTAATGAAGATAAAGATGATGGCCAATACAAGAAGGAGGAGGAGGAGGagaagaagaagaagaagaaaaagaagaagaagaagaaACTGAGTGAAGAAAGTAAAAGTAAAGAGTATAATGAGTTTGAAAGCAATGATGGTGGAGATGATGGCAAAGGTAAGAAGATGAAGAAGAAGAAACTGTGTGACAAAAGCAAAAGTAAGGAGAATTGTGAGTTCAATAGCAAGCAGATGATGAAGCAGAAGAAATCAGATGCAGAAAACCGACATGAGGGTTACAATGAATTTAAAAGCAATGAAGATAAAGATGACAATCAATACAAGAAGGAGGAAaagaagaggaagaagaaaaaactgagtgaagaaagcaaaaTTGATGATCAAAGCAAGAAGATGGAGACAAAGAAGAACGCCAAGGCAGATACTGGTGAATCTCCTAATCCTGCACACAGTGGATCATCCAAACCCAAACGTGTAACTTTTTCGGATCAAGTGGATGTTTGTTGTGATGGCTTAATCCGTGGGAAAAGGTTTACACCAGAGGAAGATGAGAAAATTAAGTTGGCTGTTTTTGATTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGGTTCTCCATTGCAAATCTCATCCTGAAATTAGAGATTGTTGGAAGGAAATTGGAGCAGCCTTACCTCAGAGGCCTTATGTTAGTGTGTATACTCGTGCTCATATTTTGTTTGAAAGGGGTGAGGATCGTAAGTGGACACCTGAAGAGTATGAATTTTTACGGAAGGTCAAGGAGCAACATGGATCTGATTGGAAATCAGTAGCTGAAGCATTGGGCAAACATCGATTTCATGTAAAGGATGCATGGCGTAGAATAAAATTAACCAACACAAACCAAGGACGATGGACCCAAGAGGAGTATCAAAATTTATTTGATTTAGTAAACCTGGATCTACGTGTGAGAGCTTCACAGGATTATAGAAAATCAAAACATGGTATGCTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAATTGACCACTAGATCCAGTGTGCTCTGCTGCaaaaagtggtatgataaattaacgtcgcctatggttgccaatggtgtatggagtgatactgatgactatcgcctggtaaatgctttatttactttgGATGCTTGCTGCATGGAGGAGGTAGATTGGGACAATCTGCTTGAGCATAGGCCTGGTGATGTATGTAGAAAACGGTGGAACCAAATGGTCCAATATATTGGAGAGCATGGGGGGAAGTCATTTGCTGAGCAGGTTGAAATTCTTGCAAAAAGATTTTGCCCTGACTTATTGGAACATCACTTCATGATAATAGACAATCTGCAAATCCAATTTTGTCTGAGTGTAGGTAAGAAGAAATATTGTGAGGACTTGGAGTGCTCTTATCTTATGATCAAGCTTGAGTACGAAACATTATGCCACTCACCATTATGA 1770 0.3486 MDEKAKKKGRKDEVMNINVADDKEVQFLDDNQESKMKKRKKDDSSLNGIQELVFSKPSKKMMKDNRLKSNKGKDDDQGKLMMKKKLSAENQHVDHNEFKSNEDKDDGQYKKEEEEEKKKKKKKKKKKKLSEESKSKEYNEFESNDGGDDGKGKKMKKKKLCDKSKSKENCEFNSKQMMKQKKSDAENRHEGYNEFKSNEDKDDNQYKKEEKKRKKKKLSEESKIDDQSKKMETKKNAKADTGESPNPAHSGSSKPKRVTFSDQVDVCCDGLIRGKRFTPEEDEKIKLAVFDYIESHGLGDEGLDMVLHCKSHPEIRDCWKEIGAALPQRPYVSVYTRAHILFERGEDRKWTPEEYEFLRKVKEQHGSDWKSVAEALGKHRFHVKDAWRRIKLTNTNQGRWTQEEYQNLFDLVNLDLRVRASQDYRKSKHGMLRDNIGWEAIGDKLTTRSSVLCCKKWYDKLTSPMVANGVWSDTDDYRLVNALFTLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEILAKRFCPDLLEHHFMIIDNLQIQFCLSVGKKKYCEDLECSYLMIKLEYETLCHSPL 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01092 589 MobiDBLite consensus disorder prediction 243 258 - -
Gma13g01092 589 Gene3D - 351 389 - -
Gma13g01092 589 PANTHER GB|AAC33480.1 16 544 - -
Gma13g01092 589 MobiDBLite consensus disorder prediction 25 258 - -
Gma13g01092 589 Gene3D - 390 466 - -
Gma13g01092 589 ProSiteProfiles Myb-like domain profile. 349 391 IPR001005 -
Gma13g01092 589 Pfam Myb-like DNA-binding domain 350 408 - -
Gma13g01092 589 SUPERFAMILY Homeodomain-like 441 519 IPR009057 -
Gma13g01092 589 MobiDBLite consensus disorder prediction 130 155 - -
Gma13g01092 589 MobiDBLite consensus disorder prediction 162 239 - -
Gma13g01092 589 ProSiteProfiles Myb-like domain profile. 463 516 IPR001005 -
Gma13g01092 589 SMART sant 467 518 IPR001005 -
Gma13g01092 589 SMART sant 273 344 IPR001005 -
Gma13g01092 589 SMART sant 396 463 IPR001005 -
Gma13g01092 589 SMART sant 346 393 IPR001005 -
Gma13g01092 589 Coils Coil 109 132 - -
Gma13g01092 589 MobiDBLite consensus disorder prediction 57 119 - -
Gma13g01092 589 Coils Coil 201 221 - -
Gma13g01092 589 MobiDBLite consensus disorder prediction 25 46 - -
Gma13g01092 589 ProSiteProfiles Myb-like domain profile. 392 461 IPR001005 -
Gma13g01092 589 SUPERFAMILY Homeodomain-like 348 408 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01092 344 516 MYB Transcription Factor Family AT4G32730 25.698 1.53e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gma13g01092 Myb_DNA-bind_6 1.7e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01092 - - gmx:100785842 764.992