Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01058 ATGGAGCATGTGATTGGTGGCAAGTTTAAACTGGGAAGGAAAATTGGGAGTGGGTCTTTTGGGGAGCTCTATTTAGGCATGCTCATGTTTCTTTTCCCTTTTGAACCTGTGAAGACCAGGCATCCACAGCTTCACTATGAGTCAAAACTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACCTCAAGTGGTTTGGAGTTGAGGGAGACTACAATGTCATGGTTATCGACCTTCTTGGACCAAGTCTGGAAGATTTATTCAACTATTGTGACCGGAAGTTCACATTGAAGACAGTGTTAATGCTTGCTGATCAATTGATTAACAGAGTTGAATATATGCATTCAAGAGGTTTCCTTCACCGTGACATAAAGCCGGACAATTTTCTAATGGGTCTAGGACGAAAAGCAAACCAAGTGTATGCCATTGACTATGGCCTTGCAAAAAAATATAGGGATCTTCAGACTCATAGGCACATACCATACAGGGAAAACAAGAACCTTACAGGCACAGCACGCTATGCAAGTGTCAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTGCTCATGTATTTCTTAAAAGGAAGTCTTCCCTGGCAAGGACTGAGGGCTGGCACCAAAAAACAAAAATATGACAAAATCAGTGAGACAAAGGTGTCAACTTCCATAGAGGTGCTCTGCAAATCATATCCCTCTGAGTTTGTGTCATACTTCCAATATTGCCGATCACTGCAATTTGAGGACAAGCCAGATTATTCGTATTTAAAGAGACTTTTCCGAGACCTATTTATTCGAGAAGGCTACCAGTTTGATTACATTTTTGACTGGACTATGTTAAAATATCCACAGATCAGTGGCAGCTCCAGAGGGCGGCATGGCACTGGCAAGGCAGCTATGCATGCAGGTCCACATGTACAAAAAGCAGAAAAGATCTCAGTTGGGAAAGAGATTCGAGAGAAATTCTCTGGTGCAGTTGAAGCGTTCTCCCGGAGGAACCCTGCAAATGCTAGTCCTTGTGGTGATCACACCAAACACAGGAGTTTTGAGGATGTACCAGTGCAAAAGGATTTGCACTATGCGCAACACAATTCCACTCGATATGGCAGCAGTTCAAGAAGAGCCATGATCTCATCAAACAAGCCAATATCCTCAGGTGACCATACTGGCAGGCAAACCATAACTGGGAGCCGTCCATCTGGTGCTCACAGAATTCAACCTGTGTATGACACCAAACAAGCAACTTATACACGCGGTGGCTCTATAAGAGGCCACCGTGATGATCCTCTGCGGAACTTCGAGCTCCTCAATATCAGGAAGTAA 1347 0.4402 MEHVIGGKFKLGRKIGSGSFGELYLGMLMFLFPFEPVKTRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCDRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYAIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLKGSLPWQGLRAGTKKQKYDKISETKVSTSIEVLCKSYPSEFVSYFQYCRSLQFEDKPDYSYLKRLFRDLFIREGYQFDYIFDWTMLKYPQISGSSRGRHGTGKAAMHAGPHVQKAEKISVGKEIREKFSGAVEAFSRRNPANASPCGDHTKHRSFEDVPVQKDLHYAQHNSTRYGSSSRRAMISSNKPISSGDHTGRQTITGSRPSGAHRIQPVYDTKQATYTRGGSIRGHRDDPLRNFELLNIRK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01058 448 Pfam Protein kinase domain 11 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01058 448 ProSiteProfiles Protein kinase domain profile. 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01058 448 MobiDBLite consensus disorder prediction 371 413 - -
Gma13g01058 448 MobiDBLite consensus disorder prediction 371 408 - -
Gma13g01058 448 SMART serkin_6 9 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma13g01058 448 Gene3D Transferase(Phosphotransferase) domain 1 1 331 - -
Gma13g01058 448 SUPERFAMILY Protein kinase-like (PK-like) 5 285 IPR011009 -
Gma13g01058 448 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 436 - -
Gma13g01058 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gma13g01058 448 PANTHER CASEIN KINASE-RELATED 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01058 Gma-Chr13 24745235 24752469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01058 8 208 MAP Kinase Kinase Kinase AT3G06030 24.074 7.12e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gma13g01058 Pkinase 2.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01058 K08960 - gmx:100789031 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma10g00360 10 3460882 3470424 Gma13g01058 13 24745235 24752469 GST
Gma19g01571 19 45118564 45124110 Gma13g01058 13 24745235 24752469 PCT
Gma03g01515 03 41416436 41422152 Gma13g01058 13 24745235 24752469 PCT
Gma13g01058 13 24745235 24752469 Gma19g01571 19 45118564 45124110 PCT
Gma13g01058 13 24745235 24752469 Gma03g01515 03 41416436 41422152 PCT