Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g01046 ATGTCAACTAAATTTTTTTTCATCAGAAACCCCAACCCTCCTTTCCTCTCCCTCCTCCTAGATCGAGTCAGGGTATCCTATTTTATCTGGAGACCTGACATGTTTTTCACAGACTTGTCTTTGGATAAACTTACATCAGATAGACTGATCGGGTGGAATTTAATTCACTTGGACAATGCCAGCCAAGACATTGAGTTGCCTTTGGGTTTGTACACCACCATAGGGCTACTGGTGAATTGCATGATCAATGTATTTATCCTTCTCAATCTTTGCCTCAAGGCTGTGTTTTTCACGGAGTTATATGCTTCTGAAACTCGTAAACTGGTTGAAAGTTTCATTAATTATGTCATTTACAAGCTATCAAGAAGTGGACTTCAAAATGTGGAGGGAAAACGGATTCATGATTTCTTTCTGACACTGGCAACCTGCAACACCATTGTGCCTCTTGTTGTTGAACAAAAGTTCAATGTCTTGGGTATGCATGAATTTGACAGTGACAGGAAGAGAATGTCAGTTATATTGGGGTACCCTGACAATTCAGTGAAAGTTTTTGTCAAAGGAGCAGACACATCCATGCTTAATGTGATAGACAGGTCATTCAAAATGGACTTAGTAAGAGCCACTGAAGCACATCTTCACTCTTACTCTTCCATGGGTTTGAGGACACTTGTTATTGGTATGAGAGACTTGAATGCTTCAGAATTTGAGCAATGGCATGCATCCTTTGAGGCAGCAAGCACTGCTGTGTTTGGAAGGGCTGCAATGCTCCGCAAGGTTTCGAGCATCGTAGAGAACAGTTTTGCCATATTAGGCATTAAAGTATGGGTTCTGACTGGAGACAAACAAGAAACTGCCATATCCATTGGCTACTACTCAAAGCTCCTAACAAGCAACATGACTCAGATTACAATCAATAGCAAGAACAGAGAATCATGCAGAAAAAGTTTGCAAGATGCCCTTGTCATGTCTAAAAAGCTCATGTCGACATCTGGCGTTGCCAACAATGCTGAAGGAAGTTCCCATGCGACTCCAGTAGCCTTGATTATTGATGGTACCAGCCTTGTGCATATTCTTGACAGTGAACTTGAAGAACAGCTATTTCAACTTGCAAGTAGAAGTTCTGTTGTTCTATGTTGTCGTGTCGCTCCGCTGCAAAAGGCTGGAATTGTTGCCCTTGTGAAGAATAGAACATCTGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTCTCAATGATTCAAATGGTTGATGTTGGAATTGGCTTCAGTGGACAAGAAGGTCCAAGCTGTAATGGCATCTGA 1305 0.4169 MSTKFFFIRNPNPPFLSLLLDRVRVSYFIWRPDMFFTDLSLDKLTSDRLIGWNLIHLDNASQDIELPLGLYTTIGLLVNCMINVFILLNLCLKAVFFTELYASETRKLVESFINYVIYKLSRSGLQNVEGKRIHDFFLTLATCNTIVPLVVEQKFNVLGMHEFDSDRKRMSVILGYPDNSVKVFVKGADTSMLNVIDRSFKMDLVRATEAHLHSYSSMGLRTLVIGMRDLNASEFEQWHASFEAASTAVFGRAAMLRKVSSIVENSFAILGIKVWVLTGDKQETAISIGYYSKLLTSNMTQITINSKNRESCRKSLQDALVMSKKLMSTSGVANNAEGSSHATPVALIIDGTSLVHILDSELEEQLFQLASRSSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMVDVGIGFSGQEGPSCNGI 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g01046 434 Pfam Cation transport ATPase (P-type) 150 193 - -
Gma13g01046 434 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 113 152 - -
Gma13g01046 434 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 153 271 - -
Gma13g01046 434 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 150 241 IPR023299 GO:0000166
Gma13g01046 434 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 267 428 - -
Gma13g01046 434 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 267 428 - -
Gma13g01046 434 Gene3D - 255 432 IPR023214 -
Gma13g01046 434 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 153 271 - -
Gma13g01046 434 SUPERFAMILY HAD-like 270 424 IPR036412 -
Gma13g01046 434 Gene3D - 128 246 IPR023299 GO:0000166
Gma13g01046 434 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 113 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g01046 Gma-Chr13 24594815 24599077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g01046 113 428 Primary Pumps ATPases AT5G04930 52.455 1.31e-119 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g01046 K14802 - gmx:100813982 527.709