Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma13g00987 ATGGCACAGGATATCGCCTTGAATCGAGACTCGGACAGCAAGGAAGATTCAAAGAGCAAGGCCAAAGATAAAACTGTCAAAACAGTACCCTTATACAAGCTTTTCTCATTTGCTGATCCTTTGGATAATTTATTGATGTTTTTGGGGACAGTGGGGGCTATTGGGAATGGAGTCTCCATACCCTTAACGATTCTGATGTTTGGCAATATGATCAATGCATTTGGAGGAACCGAAAATTCCAACGTTGTTGATGAAGTTTCCAAGGTGTCTCTGAAATTTGTATACTTCGCTGTGGGTACTTTTCTTTTGTCACTTCTGCAGTTGACTTGCTGGATGGTCACTGGGGAGAGACAAGCCACAAGAATTAGAGGTTTATACCTTAAAACAATTTTGAGGCAAGATGTCACCTTCTTTGATAAGGAAACTAGAACTGGAGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTGGGACAATTCTTGCAGTTCATAGCAACTTTCATTGGATCTTTTGCAGTAGCATTCATCAAGGGATGGCTTCTAACTGTTGTAATGCTATCTTGTATTCCACCTCTTGCGTTGGTTGGTGCTGTGCTAGGCCAGGTTATTTCAAAAGCATCATCCAGGGGACAAGAAGCTTATTCTATAGCAGCAACTGTGGCTGAGCAGACAATTGGTTCTATCCGAACTGTTGCTTCATTCACTGGGGAGAAGCAAGCTATAGCTAATTATAATCAGTCCTTAACCAAAGCTTACAAGGCTGGAGTGCAAGGGCCACTAGCTTCTGGTTTGGGGTTTGGTGCTCTGTATTTTGTTTTTACCTGCAGTTATGGTTTGGCTACATGGTTTGGTGCAAAAATGATAATAGAGAAAGGATATACAGGAGGAGAGGTTATCACAGTAATTGTTGCTGTATTGAATGGATCCATGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTGCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGCCAGAAATTGATGCTTATGACACTACTGGTCGGCAGCTTGATGACATCCGTGGAGATATAGAACTTAGGGAGGTTTGCTTTAGTTATCCTACTAGACCTGATGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACAACAGCTTTGGTAGGAGAAAGTGGGAGTGGGAAATCCACAGTTGTTGGTTTGATAGAGAGATTTTATGATCCACAGGCAGGTGAAGTTCTCATTGACAGTATCAACCTCAAAGAATTCAAACTGAAATGGATCAGACAGAAAATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACATGCAGTATTAAAGAGAATATTGCCTATGGCAAGGATGGTGCAACTGATGAAGAAATCAGAGCTGCAGCAGAACTAGCTAATGCCGCCAAATTTATAGATAAACTTCCTCTGGGACTAGACACAATGGTTGGTGAGCATGGAGCTCAGCTCTCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAAAATTGTACAGGAGGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCAAGGATCCTAATGGAGCCTATAGGCAGCTCATTAGACTGCAAGAAATTAAAGGGTCAGAAAAAAATGCAGCAAATGACACAGACAAGATAGAAAGTATAGTGCATTCTGGAAGACAATCAAGTCAAAGATCTTCCATACAATCTATAAGCCAAAGGTCATCAGGAGTTGGAAGTAGCGGTTGTAACTCATTCTCAGAATCACATGGTGTGCCTGCAACAGTTGGCTTCTTGGAACCTTCAGGCGGAAGACCTCAAGCTCCTCCTTCAACAGTTTCTTCACCACCAGAAGTGCCACTTTATCGCCTGGCATATTTAAACAAGCCTGAGATTCCATTCTTACTGATAGGGACTATAGCCGCAGTAGGATCTGGAGTAATATTACCCATTCTTGCACTCTTCATCTCCAAAATGATAAGTATTTTCTATGAGCCAGTTGATGAACTTCATAAAGATTCAAAACATTGGGCATTACTATTTGTTGCACTTGGTGTGGTATCATTTGTCATGCCTCCATGTAGATTCTACCTTTTTGGCATTGCTGGTGGTAAGTTAATCAAAAGGATCCGGAAAATGTGTTTTGAGAAAGTAGTTCACATGGAAGTTAGTTGGTTCGATGAAGCTGAACATTCAAGTGGAGCAATAGGAGCAAGGCTCTCATCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATATTGCTACAGCAGTAGCTGGCTTGGTAATTGCTTTTGATGCAAGCTGGCAGCTTGCTCTTATAATTCTTGCTTTGGCACCTCTATTAGCACTAAATGGATACGTGCAATTGAAGGTCTTGAAAGGATTCAGCGCAGATGCAAAGAAACTGTATGAGGAAGCAAGTCAAGTGGCGAATGATGCTCTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTAATGAAATCATACGAGGAAAAATGTGAAGGACCAATTAGGACAGGCATAAGGCGAGGAATAATAAGTGGAATTAGTTATGGGGTATCATTCTTTATGCTGTATGCAGTTTATGCATGCAGTTTTTATGCTGGGGCTCGACTTGTACAGGATGGAAAAGCAACAATGTTGGATGTTTTCCGTGTCTTTTTTGCTCTCAACTTGGCAGCTGTGGGAATCTCTCAATCTGGATCTTTGGTCCCTGATTCAAGTAATTCAAAAAGTGCCGCTGCTTCTGTATTTGCTATTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTGACATTGGAAGAAGTCAAGGGAGAGATTGAATTTAAGCATGTAAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACCATTCATAATGGCAAGACAGTTGCACTGGTTGGAGAAAGTGGAAGTGGAAAATCAACGGTGATCTCATTATTACAAAGATTTTATGATCCAGACTTGGGTAACATTACACTGGATGGAACTGAAATCCAAAGGATGCAAGTTAAATGGCTGAGACAACAGATGGGCCTGGTGAGCCAAGAACCTGTGCTGTTTAATGACACCATCCGAGCCAATATTGCATATGGAAAGGGCGGCGATGCAACAGAGGCAGAAATTATAGCTGCAGCAGAACTCGCAAATGCTCACAACTTCACTTGTAGTTTGCAGGAGGGTTATGACACAATAGTAGGGGAAAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGGGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTACTACTAGATGAAGCCACAAGTGCACTGGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTAGACTGCGTTATGGTGGACCGAACCACAATAGTAGTGGCTCATAGGCTATCCACTATTAAGGGTGCAGATTTAATCGCAGTAGTTAAAAACGGGGTAATAGCAGAAAAGGGAAAACATGAAGCATTACTCAACAAAGGAGTTCTTTAA 3774 0.4192 MAQDIALNRDSDSKEDSKSKAKDKTVKTVPLYKLFSFADPLDNLLMFLGTVGAIGNGVSIPLTILMFGNMINAFGGTENSNVVDEVSKVSLKFVYFAVGTFLLSLLQLTCWMVTGERQATRIRGLYLKTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQFIATFIGSFAVAFIKGWLLTVVMLSCIPPLALVGAVLGQVISKASSRGQEAYSIAATVAEQTIGSIRTVASFTGEKQAIANYNQSLTKAYKAGVQGPLASGLGFGALYFVFTCSYGLATWFGAKMIIEKGYTGGEVITVIVAVLNGSMSLGQASPSLSAFAAGQAAAFKMFETIKRKPEIDAYDTTGRQLDDIRGDIELREVCFSYPTRPDELIFNGFSLSIPSGTTTALVGESGSGKSTVVGLIERFYDPQAGEVLIDSINLKEFKLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAAELANAAKFIDKLPLGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKIVQEALDRIMINRTTVIVAHRLSTIRNADSIAVIHQGKIVERGSHAELTKDPNGAYRQLIRLQEIKGSEKNAANDTDKIESIVHSGRQSSQRSSIQSISQRSSGVGSSGCNSFSESHGVPATVGFLEPSGGRPQAPPSTVSSPPEVPLYRLAYLNKPEIPFLLIGTIAAVGSGVILPILALFISKMISIFYEPVDELHKDSKHWALLFVALGVVSFVMPPCRFYLFGIAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNIATAVAGLVIAFDASWQLALIILALAPLLALNGYVQLKVLKGFSADAKKLYEEASQVANDALGSIRTVASFCAEKKVMKSYEEKCEGPIRTGIRRGIISGISYGVSFFMLYAVYACSFYAGARLVQDGKATMLDVFRVFFALNLAAVGISQSGSLVPDSSNSKSAAASVFAILDRKSQIDPSDDSGLTLEEVKGEIEFKHVSFKYPTRPDVQIFRDLCLTIHNGKTVALVGESGSGKSTVISLLQRFYDPDLGNITLDGTEIQRMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHNFTCSLQEGYDTIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDCVMVDRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLNKGVL 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma13g00987 1257 ProSitePatterns ABC transporters family signature. 507 521 IPR017871 GO:0005524
Gma13g00987 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1027 1257 IPR003439 GO:0005524
Gma13g00987 1257 ProSitePatterns ABC transporters family signature. 1167 1181 IPR017871 GO:0005524
Gma13g00987 1257 PANTHER - 10 1253 - -
Gma13g00987 1257 Pfam ABC transporter transmembrane region 705 976 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00987 1257 Pfam ABC transporter transmembrane region 46 319 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00987 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 706 992 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00987 1257 SUPERFAMILY ABC transporter transmembrane region 27 352 IPR036640 GO:0005524|GO:0016021
Gma13g00987 1257 Pfam ABC transporter 387 535 IPR003439 GO:0005524
Gma13g00987 1257 Pfam ABC transporter 1047 1195 IPR003439 GO:0005524
Gma13g00987 1257 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 368 604 IPR003439 GO:0005524
Gma13g00987 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 606 IPR027417 -
Gma13g00987 1257 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 47 333 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gma13g00987 1257 CDD ABC_6TM_Pgp_ABCB1_D1_like 46 329 - -
Gma13g00987 1257 MobiDBLite consensus disorder prediction 1 21 - -
Gma13g00987 1257 CDD ABC_MTABC3_MDL1_MDL2 1027 1256 - -
Gma13g00987 1257 Gene3D - 366 619 IPR027417 -
Gma13g00987 1257 SMART AAA_5 395 581 IPR003593 -
Gma13g00987 1257 SMART AAA_5 1054 1247 IPR003593 -
Gma13g00987 1257 Gene3D ABC transporter type 1, transmembrane domain 91 1001 IPR036640 GO:0005524|GO:0016021
Gma13g00987 1257 MobiDBLite consensus disorder prediction 626 657 - -
Gma13g00987 1257 Gene3D - 1017 1256 IPR027417 -
Gma13g00987 1257 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1016 1255 IPR027417 -
Gma13g00987 1257 CDD ABC_MTABC3_MDL1_MDL2 368 606 - -
Gma13g00987 1257 CDD ABC_6TM_Pgp_ABCB1_D2_like 695 1010 - -
Gma13g00987 1257 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 10 1253 - -
Gma13g00987 1257 SUPERFAMILY ABC transporter transmembrane region 693 1011 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma13g00987 Gma-Chr13 23973262 23979000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma13g00987 4 612 Calmodulin-binding Proteins AT2G36910 35.332 6.14e-107 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma13g00987 K05658 - gmx:100799760 2315.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma17g00382 17 3093953 3099203 Gma13g00987 13 23973262 23979000 GST